Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is metF

Identifier: 110680247

GI number: 110680247

Start: 2925059

End: 2926042

Strand: Direct

Name: metF

Synonym: RD1_3056

Alternate gene names: NA

Gene position: 2925059-2926042 (Clockwise)

Preceding gene: 110680246

Following gene: 110680248

Centisome position: 70.77

GC content: 58.74

Gene sequence:

>984_bases
TTGGGCCTGAGCCTGCCACGCCTGATAGACACACTCTTGTCCCGAAAGGAACGCCTCGTGGCCTTGTTGAATTTCAAGCG
CAAAGTTGCGCCAGCCTCGCCTTCCGTCAATCCGGATGTCGAGGCGTTTTTGCAGGATTACTCGATCGAAGTCATGCCGC
GCACCGCCGAGAAAGTGGATGATTTCCGCGCCCTGCTGCCCGAAGGCACCCGCGTATATATCGCCCATATCGAAGGAACG
CCCATTGAGGAGATGGTCGCAACCGCGAAACGTCTGAATGACGACGGGTTCGCAGTAATGCCACATTTCCCGGCCCGCAT
CATCAGGGACCGCGCCACCCTCAAGGACTGGATTGCCCGGTATCAGGGCGAGGCGAATGTACATCAGGCGCTGCTGCTGG
CAGGCGGTGTCGAGAAGCCGCTCGGGGACTTTGACAGCTCCATGCAGTTGATGGAAACGGGTCTGTTTGATGAGGCCGGG
TTCAAACGCCTGCATGTTGCGGGCCACCCCGAGGGCAACCGCGATATTGACACCGATGGGTCGATGAAAAACGTATCCGC
CGCGCTGCGCTGGAAAAACGATTTTCAATCCCGCACGGATGCGCAGTTGGCCATCGCGACGCAATTTGCCTTTGACGCCA
AACCCATCATCGCATGGGCCGACACCATCGCCGCCGAAGGGATCACCCTGCCCGTTCACATTGGCATTGCCGGTCCGGCC
AAGCTGCAAACGCTGATCAAGTTTGCGATTGCCTGCGGCGTTGGCCCCTCGCTGAAGGTGCTGCAGAAGCGCGCGATGGA
TGTCACAAAACTCTTGCTGCCTTATGAGCCGACGGATGTCGTTGCGCAATTGGCCGCCCACAAGGCCGCGAATCCTGACT
TCAACATCACGAACGTTCATTTCTTTCCACTCGGCGGGATCAAGACGAACGCCAACTGGGCCATCGAAAACGGCGGCTCC
TCCGCAAAACCGGCAAACGCCTGA

Upstream 100 bases:

>100_bases
AGATGCCGGGAACACCGGATGAAATCGCAGATGCAGAAGCTGCCCGACTAGATGCTGAATTTGACCGTGCGCGCCTCAAG
GCGCTGATTGATAACGATGG

Downstream 100 bases:

>100_bases
TCCAAGGACTTATTCCTGATGACAAAGACCATCGTCGAATCAAAAACCAAGACTGCGATCATCGGGTTCGATCAGCCCTT
TTGCGTGATCGGGGAACGCA

Product: 5,10-methylenetetrahydrofolate reductase, putative

Products: NA

Alternate protein names: 5 10-Methylenetetrahydrofolate Reductase; Methylenetetrahydrofolate Reductase Family Protein; Metfprotein-Like; MetF-Like Protein; Metfprotein -Like Protein

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MGLSLPRLIDTLLSRKERLVALLNFKRKVAPASPSVNPDVEAFLQDYSIEVMPRTAEKVDDFRALLPEGTRVYIAHIEGT
PIEEMVATAKRLNDDGFAVMPHFPARIIRDRATLKDWIARYQGEANVHQALLLAGGVEKPLGDFDSSMQLMETGLFDEAG
FKRLHVAGHPEGNRDIDTDGSMKNVSAALRWKNDFQSRTDAQLAIATQFAFDAKPIIAWADTIAAEGITLPVHIGIAGPA
KLQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTDVVAQLAAHKAANPDFNITNVHFFPLGGIKTNANWAIENGGS
SAKPANA

Sequences:

>Translated_327_residues
MGLSLPRLIDTLLSRKERLVALLNFKRKVAPASPSVNPDVEAFLQDYSIEVMPRTAEKVDDFRALLPEGTRVYIAHIEGT
PIEEMVATAKRLNDDGFAVMPHFPARIIRDRATLKDWIARYQGEANVHQALLLAGGVEKPLGDFDSSMQLMETGLFDEAG
FKRLHVAGHPEGNRDIDTDGSMKNVSAALRWKNDFQSRTDAQLAIATQFAFDAKPIIAWADTIAAEGITLPVHIGIAGPA
KLQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTDVVAQLAAHKAANPDFNITNVHFFPLGGIKTNANWAIENGGS
SAKPANA
>Mature_326_residues
GLSLPRLIDTLLSRKERLVALLNFKRKVAPASPSVNPDVEAFLQDYSIEVMPRTAEKVDDFRALLPEGTRVYIAHIEGTP
IEEMVATAKRLNDDGFAVMPHFPARIIRDRATLKDWIARYQGEANVHQALLLAGGVEKPLGDFDSSMQLMETGLFDEAGF
KRLHVAGHPEGNRDIDTDGSMKNVSAALRWKNDFQSRTDAQLAIATQFAFDAKPIIAWADTIAAEGITLPVHIGIAGPAK
LQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTDVVAQLAAHKAANPDFNITNVHFFPLGGIKTNANWAIENGGSS
AKPANA

Specific function: Unknown

COG id: COG0685

COG function: function code E; 5,10-methylenetetrahydrofolate reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35596; Mature: 35465

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSLPRLIDTLLSRKERLVALLNFKRKVAPASPSVNPDVEAFLQDYSIEVMPRTAEKVD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCHHHHHH
DFRALLPEGTRVYIAHIEGTPIEEMVATAKRLNDDGFAVMPHFPARIIRDRATLKDWIAR
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
YQGEANVHQALLLAGGVEKPLGDFDSSMQLMETGLFDEAGFKRLHVAGHPEGNRDIDTDG
HCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
SMKNVSAALRWKNDFQSRTDAQLAIATQFAFDAKPIIAWADTIAAEGITLPVHIGIAGPA
CHHHHHHHHHCCHHHCCCCCCEEEEEEEHHCCCCCCEEEHHHHHHCCEEEEEEECCCCHH
KLQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTDVVAQLAAHKAANPDFNITNVH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEE
FFPLGGIKTNANWAIENGGSSAKPANA
EEECCCEEECCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
GLSLPRLIDTLLSRKERLVALLNFKRKVAPASPSVNPDVEAFLQDYSIEVMPRTAEKVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEECCHHHHHH
DFRALLPEGTRVYIAHIEGTPIEEMVATAKRLNDDGFAVMPHFPARIIRDRATLKDWIAR
HHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH
YQGEANVHQALLLAGGVEKPLGDFDSSMQLMETGLFDEAGFKRLHVAGHPEGNRDIDTDG
HCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
SMKNVSAALRWKNDFQSRTDAQLAIATQFAFDAKPIIAWADTIAAEGITLPVHIGIAGPA
CHHHHHHHHHCCHHHCCCCCCEEEEEEEHHCCCCCCEEEHHHHHHCCEEEEEEECCCCHH
KLQTLIKFAIACGVGPSLKVLQKRAMDVTKLLLPYEPTDVVAQLAAHKAANPDFNITNVH
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEE
FFPLGGIKTNANWAIENGGSSAKPANA
EEECCCEEECCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA