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The map label for this gene is 110680199

Identifier: 110680199

GI number: 110680199

Start: 2880551

End: 2881360

Strand: Direct

Name: 110680199

Synonym: RD1_3001

Alternate gene names: NA

Gene position: 2880551-2881360 (Clockwise)

Preceding gene: 110680198

Following gene: 110680200

Centisome position: 69.69

GC content: 62.72

Gene sequence:

>810_bases
GTGATCCCTCTGGCCCAGATGGCAGAGGCGGTTTTGCGCACGGCGGATGGGCGCGCAAAGACGGCCCTGTCGCGCGAATA
CGCCAGCGCATGGCAAGCCGCGCGCGAAGCCGGGGAGACACCGGACATTGGCCGCGCAGATCCGCCAATGCACCCGGCGC
GACCGCCAAGCCCGCAGTTGCTCAATCCGCGCGACGTGCCGCACCGCAAACCCGGCTCGCCCGAAGGGCGCGTCGCGCTG
CTGCATGCGGTGGCCCATATCGAACTCAATGCGGTCGATCTGCACTGGGATATCATCGCGCGTTTTGCGCATGTGAAAAT
GCCGATGGGATTTTATGACGATTGGGTCAAGGCGGCGGATGAGGAATCCAAGCATTTCAACCTGATGTGCGACTGCCTTG
AAGAGTTCGGCAGCCATTATGGCGCCTTGCCCGCGCATGCCGGGATGTGGCGGGCGGCCGAGGACACGGTGTATGATTTC
ATGGGCCGCCTTGCGGTCGTGCCCATGGTGCTTGAGGCGCGCGGCCTGGATGTCACCCCGGGGATGATCGAGGTGTTTCG
CCGTGCCAAGGCCACCAGCGCCGTCGAGGCGCTGGAGTTGATTTACAGCGAGGAAGTCGCCCATGTCGCCTATGGGTCAA
AATGGTTTCATTTTCTGTGCGGGCGCAACGATGAAGACCCCAAGGAACGGTTCCACGCGCTGGTGCGCAAATATTTCCAC
GGCCCCCTGAAACCGCCCTTCAACGAAGAGAAACGTGCCGAGGCCGGGATACCGCCGGACTTCTATTGGCCACTCACAGC
CAAGGCCTAG

Upstream 100 bases:

>100_bases
CGACCTTTCTGATTGCGGCGGACGGCACGATTGCCAAGATCTGGAACAAGGTCAAAGTCCCCGGACATGTCGAGGCCGTT
CTTGAGGAAGTGCGCGCCCT

Downstream 100 bases:

>100_bases
AGCGCGAAACCGCCGGAAACAGGCGGTTTTTTGCCCATTTACAACAACTCAACCTTAAGTAGCACACAATGCAGGAAAGA
GGGTTGCCCCTTTGAAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIPLAQMAEAVLRTADGRAKTALSREYASAWQAAREAGETPDIGRADPPMHPARPPSPQLLNPRDVPHRKPGSPEGRVAL
LHAVAHIELNAVDLHWDIIARFAHVKMPMGFYDDWVKAADEESKHFNLMCDCLEEFGSHYGALPAHAGMWRAAEDTVYDF
MGRLAVVPMVLEARGLDVTPGMIEVFRRAKATSAVEALELIYSEEVAHVAYGSKWFHFLCGRNDEDPKERFHALVRKYFH
GPLKPPFNEEKRAEAGIPPDFYWPLTAKA

Sequences:

>Translated_269_residues
MIPLAQMAEAVLRTADGRAKTALSREYASAWQAAREAGETPDIGRADPPMHPARPPSPQLLNPRDVPHRKPGSPEGRVAL
LHAVAHIELNAVDLHWDIIARFAHVKMPMGFYDDWVKAADEESKHFNLMCDCLEEFGSHYGALPAHAGMWRAAEDTVYDF
MGRLAVVPMVLEARGLDVTPGMIEVFRRAKATSAVEALELIYSEEVAHVAYGSKWFHFLCGRNDEDPKERFHALVRKYFH
GPLKPPFNEEKRAEAGIPPDFYWPLTAKA
>Mature_269_residues
MIPLAQMAEAVLRTADGRAKTALSREYASAWQAAREAGETPDIGRADPPMHPARPPSPQLLNPRDVPHRKPGSPEGRVAL
LHAVAHIELNAVDLHWDIIARFAHVKMPMGFYDDWVKAADEESKHFNLMCDCLEEFGSHYGALPAHAGMWRAAEDTVYDF
MGRLAVVPMVLEARGLDVTPGMIEVFRRAKATSAVEALELIYSEEVAHVAYGSKWFHFLCGRNDEDPKERFHALVRKYFH
GPLKPPFNEEKRAEAGIPPDFYWPLTAKA

Specific function: Unknown

COG id: COG2833

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007402
- InterPro:   IPR009078
- InterPro:   IPR011197 [H]

Pfam domain/function: PF04305 DUF455 [H]

EC number: NA

Molecular weight: Translated: 30131; Mature: 30131

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLAQMAEAVLRTADGRAKTALSREYASAWQAAREAGETPDIGRADPPMHPARPPSPQL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LNPRDVPHRKPGSPEGRVALLHAVAHIELNAVDLHWDIIARFAHVKMPMGFYDDWVKAAD
CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCC
EESKHFNLMCDCLEEFGSHYGALPAHAGMWRAAEDTVYDFMGRLAVVPMVLEARGLDVTP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GMIEVFRRAKATSAVEALELIYSEEVAHVAYGSKWFHFLCGRNDEDPKERFHALVRKYFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GPLKPPFNEEKRAEAGIPPDFYWPLTAKA
CCCCCCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPLAQMAEAVLRTADGRAKTALSREYASAWQAAREAGETPDIGRADPPMHPARPPSPQL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LNPRDVPHRKPGSPEGRVALLHAVAHIELNAVDLHWDIIARFAHVKMPMGFYDDWVKAAD
CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCC
EESKHFNLMCDCLEEFGSHYGALPAHAGMWRAAEDTVYDFMGRLAVVPMVLEARGLDVTP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
GMIEVFRRAKATSAVEALELIYSEEVAHVAYGSKWFHFLCGRNDEDPKERFHALVRKYFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHC
GPLKPPFNEEKRAEAGIPPDFYWPLTAKA
CCCCCCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]