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The map label for this gene is 110680180

Identifier: 110680180

GI number: 110680180

Start: 2856272

End: 2856802

Strand: Reverse

Name: 110680180

Synonym: RD1_2981

Alternate gene names: NA

Gene position: 2856802-2856272 (Counterclockwise)

Preceding gene: 110680182

Following gene: 110680179

Centisome position: 69.12

GC content: 61.96

Gene sequence:

>531_bases
GTGATGGGGCGGGCGCGTAGAAATACAGATGAGGTGGGTATGAGTGATATCGAAGAGTTGAATGGCCGAATTCTGGCCGC
CATGGACCGTGTCGCGAAGGGCGTTGATGCGCTGGCCAAGAACGACAGCGGCGAGGTCGAGGGGCTGCAGCAGGCGCTGG
CGGAGGAAAAACAGGTCAACGCTCAGCTGACCGAGCGCGTCCGGGTGCTGGCAGAGCGTCAGGATCAGGCGATTGCCGCC
TTGGAAACCAAAGCCGAAGAGGCCACGTCACGGGTGGCCGCGTTGGACGAAGAATTGCAGAAACTCAAGAAAGCGAACGG
GCTTTTGTCGGAGGCGTGCGGGGCCTTGCGCGAGGCCAATGCCGAAGGGGTTGGCGATGCGAGCCTGATCAACAAGGCGA
TGGAGGCAGAGTTGGACGCCATCCGCGCGATGCGCCGTGCCGAGGTTCTGGAGGCCGATCAGATACTGTCAGCCCTGACG
CCGCTACTGGCCGCAAGTGCCACATCACAAGACACAGAGGAGGCGCACTGA

Upstream 100 bases:

>100_bases
AGGCGCAACCCGTTGAAGCGATTGAAAAGCGCATTTGTTGTGTCGTCACGATAGGGGTACGATTGCCCGAGCAGGTGTCG
ATTCGCCAAAACCGGGCAGG

Downstream 100 bases:

>100_bases
TGCCTGAGGTTCAAGTTTCCATCGGCGGGCGTGAATTCGAGGTCGCCTGTCAGGAGGGCGAGGAGCATTACCTGCATACC
GCCGCCAAGATGCTGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MMGRARRNTDEVGMSDIEELNGRILAAMDRVAKGVDALAKNDSGEVEGLQQALAEEKQVNAQLTERVRVLAERQDQAIAA
LETKAEEATSRVAALDEELQKLKKANGLLSEACGALREANAEGVGDASLINKAMEAELDAIRAMRRAEVLEADQILSALT
PLLAASATSQDTEEAH

Sequences:

>Translated_176_residues
MMGRARRNTDEVGMSDIEELNGRILAAMDRVAKGVDALAKNDSGEVEGLQQALAEEKQVNAQLTERVRVLAERQDQAIAA
LETKAEEATSRVAALDEELQKLKKANGLLSEACGALREANAEGVGDASLINKAMEAELDAIRAMRRAEVLEADQILSALT
PLLAASATSQDTEEAH
>Mature_176_residues
MMGRARRNTDEVGMSDIEELNGRILAAMDRVAKGVDALAKNDSGEVEGLQQALAEEKQVNAQLTERVRVLAERQDQAIAA
LETKAEEATSRVAALDEELQKLKKANGLLSEACGALREANAEGVGDASLINKAMEAELDAIRAMRRAEVLEADQILSALT
PLLAASATSQDTEEAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18824; Mature: 18824

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGRARRNTDEVGMSDIEELNGRILAAMDRVAKGVDALAKNDSGEVEGLQQALAEEKQVN
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQLTERVRVLAERQDQAIAALETKAEEATSRVAALDEELQKLKKANGLLSEACGALREAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
AEGVGDASLINKAMEAELDAIRAMRRAEVLEADQILSALTPLLAASATSQDTEEAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMGRARRNTDEVGMSDIEELNGRILAAMDRVAKGVDALAKNDSGEVEGLQQALAEEKQVN
CCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQLTERVRVLAERQDQAIAALETKAEEATSRVAALDEELQKLKKANGLLSEACGALREAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
AEGVGDASLINKAMEAELDAIRAMRRAEVLEADQILSALTPLLAASATSQDTEEAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA