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The map label for this gene is coxM [H]

Identifier: 110680171

GI number: 110680171

Start: 2848829

End: 2849620

Strand: Reverse

Name: coxM [H]

Synonym: RD1_2972

Alternate gene names: 110680171

Gene position: 2849620-2848829 (Counterclockwise)

Preceding gene: 110680172

Following gene: 110680162

Centisome position: 68.95

GC content: 61.99

Gene sequence:

>792_bases
ATGTATAACTTCGATGTGGAAATGCCCACCAGTATCGCCGATGCGGTTGCTGCCATGGGCAAGGAAGATGCGCAGGCTCT
GGGGGGCGGTCAGACGCTGATCCCAACGCTGAAACAACGCCTGGCAAGCCCGAGCGTTCTCGTGAGTCTGAGCGGTATCC
CCGAGATGAAGGGCGTGTGCAAAAATGATGATGGGTTGCTGTGTGTCGGTGGCGCGACCACCCACGCGACCGTCGCCCGC
GATGCGGCGGCCAGCTTCCCCGGCCTTGCGGGGCTGGCCAGCCATATCGGCGATCCTGCCGTGCGCAATCGCGGCACCAT
CGGGGGCAGCCTTGCCAACAACGACCCGGCCGCCTGCTATCCTGCGGCAGCTTTGGGCGCAGGGGCGACCATCGTGACAA
ACAACCGCGAGATCGCAGCGGATGATTATTTTCAGGGCATGTTCACGACCGACCTTGAAGAGGGCGAAATCATCACCGAG
GTCCGCTTCCCGATCCCCGAGGCATCAAGCTATCAGAAGTTCCTGCAACCGGCCTCGCGTTTTGCGCTTGTCGGTGTCTT
TGTCGCCAAGTTCGCGGATGGTGTGCGTGTGGCCGTAACAGGGGCGAGCAACGATGGCGTGTTCCGCTGGGCCGAGGCCG
AAGCAGCCCTCTCGGCGAATTTTGCGCCAGAAGCGTTGGACGGACTGAGTGCGGACAGCGAGGATATGATCAACGACCTG
CACGGCACCGCCGCTTACCGGGCGCATATCGTGGGTGTCATGACCAAACGTGCGGTTGCTGCAGCAGGCTAA

Upstream 100 bases:

>100_bases
TCCCGCTGAACGGGGCGAGGGGCGTTTGCCTCTTGCCCCCAACAGGGAGTTTTAGGCCGAGGAAACGACGTGCTGTTCCC
GGCTTTGGAAAGGAAAGACA

Downstream 100 bases:

>100_bases
ATGCTGCGCGCATGGCACAAATGATAAACCCGGGACCACGGCGACCGGGTTTATCCAAACCGGAAAACCAGCGCCGAACG
ATCCCCATCCACATCGACAC

Product: carbon monoxide dehydrogenase, medium subunit

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MYNFDVEMPTSIADAVAAMGKEDAQALGGGQTLIPTLKQRLASPSVLVSLSGIPEMKGVCKNDDGLLCVGGATTHATVAR
DAAASFPGLAGLASHIGDPAVRNRGTIGGSLANNDPAACYPAAALGAGATIVTNNREIAADDYFQGMFTTDLEEGEIITE
VRFPIPEASSYQKFLQPASRFALVGVFVAKFADGVRVAVTGASNDGVFRWAEAEAALSANFAPEALDGLSADSEDMINDL
HGTAAYRAHIVGVMTKRAVAAAG

Sequences:

>Translated_263_residues
MYNFDVEMPTSIADAVAAMGKEDAQALGGGQTLIPTLKQRLASPSVLVSLSGIPEMKGVCKNDDGLLCVGGATTHATVAR
DAAASFPGLAGLASHIGDPAVRNRGTIGGSLANNDPAACYPAAALGAGATIVTNNREIAADDYFQGMFTTDLEEGEIITE
VRFPIPEASSYQKFLQPASRFALVGVFVAKFADGVRVAVTGASNDGVFRWAEAEAALSANFAPEALDGLSADSEDMINDL
HGTAAYRAHIVGVMTKRAVAAAG
>Mature_263_residues
MYNFDVEMPTSIADAVAAMGKEDAQALGGGQTLIPTLKQRLASPSVLVSLSGIPEMKGVCKNDDGLLCVGGATTHATVAR
DAAASFPGLAGLASHIGDPAVRNRGTIGGSLANNDPAACYPAAALGAGATIVTNNREIAADDYFQGMFTTDLEEGEIITE
VRFPIPEASSYQKFLQPASRFALVGVFVAKFADGVRVAVTGASNDGVFRWAEAEAALSANFAPEALDGLSADSEDMINDL
HGTAAYRAHIVGVMTKRAVAAAG

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=292, Percent_Identity=25.3424657534247, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 27007; Mature: 27007

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNFDVEMPTSIADAVAAMGKEDAQALGGGQTLIPTLKQRLASPSVLVSLSGIPEMKGVC
CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHCCCC
KNDDGLLCVGGATTHATVARDAAASFPGLAGLASHIGDPAVRNRGTIGGSLANNDPAACY
CCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC
PAAALGAGATIVTNNREIAADDYFQGMFTTDLEEGEIITEVRFPIPEASSYQKFLQPASR
CHHHHCCCEEEEECCCEECCHHHHCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
FALVGVFVAKFADGVRVAVTGASNDGVFRWAEAEAALSANFAPEALDGLSADSEDMINDL
HHHHHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHCCCCHHHHHCCCCCHHHHHHHH
HGTAAYRAHIVGVMTKRAVAAAG
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYNFDVEMPTSIADAVAAMGKEDAQALGGGQTLIPTLKQRLASPSVLVSLSGIPEMKGVC
CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCHHCCCC
KNDDGLLCVGGATTHATVARDAAASFPGLAGLASHIGDPAVRNRGTIGGSLANNDPAACY
CCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC
PAAALGAGATIVTNNREIAADDYFQGMFTTDLEEGEIITEVRFPIPEASSYQKFLQPASR
CHHHHCCCEEEEECCCEECCHHHHCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
FALVGVFVAKFADGVRVAVTGASNDGVFRWAEAEAALSANFAPEALDGLSADSEDMINDL
HHHHHHHHHHHCCCEEEEEEECCCCCEEEEECHHHHHHCCCCHHHHHCCCCCHHHHHHHH
HGTAAYRAHIVGVMTKRAVAAAG
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]