| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cysH [H]
Identifier: 110680166
GI number: 110680166
Start: 2844809
End: 2845570
Strand: Direct
Name: cysH [H]
Synonym: RD1_2967
Alternate gene names: 110680166
Gene position: 2844809-2845570 (Clockwise)
Preceding gene: 110680165
Following gene: 110680167
Centisome position: 68.83
GC content: 61.55
Gene sequence:
>762_bases ATGCCGCTTGATGAGGCGCAGCCTGTGGACCAGAGCGGCAGGCGCACAGATGAGTTGCAGGCGCTGGTGCAGGAGCTGAA CACGCGCCTGCGCCATCATGGGGCGGTGGATGTGCTGCAAGTCGCTCTGGCCGAAATCACCCCGCTGAGCCTCGTGTCCA GCTTTGGGGCGGAATCGGTGGCCTTGCTGCATCTGGCCTCCATGGTGGATCGCAACATACCGGTGATCTTTGTGGATACC GAAATGCTGTTCACGCAGACGCTGGTCTATCAACAGGAACTTGCGGAGCGTCTGGGCCTGCGCAACCTGCGGATCGTGCG CAGCGGTGATATCGCGCACCGCGACCCAACTGGCACAATGCACCGGCACGACCCGGACGGATGCTGTGCCTTGCGCAAAA CCGAACCGCTGCAAAAGGCGCTTGTCGGCAGCAATGGCTGGATCACCGGGCGCAAACGCTATCAATCCGGCCAACGCGCA GCACTTGAACACTTCGAGATCGAAGCGCAGACCGGCCGCATCAAGGTGAACCCGCTCGCCTATTGGCAAGCCGGAGACGT GGCCGACTACATCACTGAAAACCGCCTGCCCCGGCACCCGCTGGTCGCACAAGGCTACCCATCCATCGGCTGTGCGCCCT GTACCTCGCCAGTGCAAAGCGGCGAAGACGCGCGCGCCGGACGCTGGCGCAACACTGAAAAAGACGAATGCGGCATCCAT TTTGTGAACGGCAAAGTGGTCCGCCAAGGAGATATGAAATGA
Upstream 100 bases:
>100_bases CTTGAATTGCGCGACGCACCCGAAGAAACGTTCCTCGAAACCTATCGCCGCATCGGTCTGGCCCCCTTCAAGGCGGCCCT TTATCCGGAGGTGCAGGCCG
Downstream 100 bases:
>100_bases CTGTCATCGTAACCGATACGGGCTTTGCCCCGGACGACTGGACCGAGGGTTTTGTGGCCCTCGGCGCTGCCAATGACGCC GAAGCGCTGGATGTGCCCTC
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPLDEAQPVDQSGRRTDELQALVQELNTRLRHHGAVDVLQVALAEITPLSLVSSFGAESVALLHLASMVDRNIPVIFVDT EMLFTQTLVYQQELAERLGLRNLRIVRSGDIAHRDPTGTMHRHDPDGCCALRKTEPLQKALVGSNGWITGRKRYQSGQRA ALEHFEIEAQTGRIKVNPLAYWQAGDVADYITENRLPRHPLVAQGYPSIGCAPCTSPVQSGEDARAGRWRNTEKDECGIH FVNGKVVRQGDMK
Sequences:
>Translated_253_residues MPLDEAQPVDQSGRRTDELQALVQELNTRLRHHGAVDVLQVALAEITPLSLVSSFGAESVALLHLASMVDRNIPVIFVDT EMLFTQTLVYQQELAERLGLRNLRIVRSGDIAHRDPTGTMHRHDPDGCCALRKTEPLQKALVGSNGWITGRKRYQSGQRA ALEHFEIEAQTGRIKVNPLAYWQAGDVADYITENRLPRHPLVAQGYPSIGCAPCTSPVQSGEDARAGRWRNTEKDECGIH FVNGKVVRQGDMK >Mature_252_residues PLDEAQPVDQSGRRTDELQALVQELNTRLRHHGAVDVLQVALAEITPLSLVSSFGAESVALLHLASMVDRNIPVIFVDTE MLFTQTLVYQQELAERLGLRNLRIVRSGDIAHRDPTGTMHRHDPDGCCALRKTEPLQKALVGSNGWITGRKRYQSGQRAA LEHFEIEAQTGRIKVNPLAYWQAGDVADYITENRLPRHPLVAQGYPSIGCAPCTSPVQSGEDARAGRWRNTEKDECGIHF VNGKVVRQGDMK
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=197, Percent_Identity=32.994923857868, Blast_Score=92, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6325425, Length=231, Percent_Identity=28.1385281385281, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 28107; Mature: 27976
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDEAQPVDQSGRRTDELQALVQELNTRLRHHGAVDVLQVALAEITPLSLVSSFGAESV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCHHH ALLHLASMVDRNIPVIFVDTEMLFTQTLVYQQELAERLGLRNLRIVRSGDIAHRDPTGTM HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC HRHDPDGCCALRKTEPLQKALVGSNGWITGRKRYQSGQRAALEHFEIEAQTGRIKVNPLA CCCCCCCCEECCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHEEEECCCEEEECEEE YWQAGDVADYITENRLPRHPLVAQGYPSIGCAPCTSPVQSGEDARAGRWRNTEKDECGIH EECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEE FVNGKVVRQGDMK EECCEEEECCCCC >Mature Secondary Structure PLDEAQPVDQSGRRTDELQALVQELNTRLRHHGAVDVLQVALAEITPLSLVSSFGAESV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCHHH ALLHLASMVDRNIPVIFVDTEMLFTQTLVYQQELAERLGLRNLRIVRSGDIAHRDPTGTM HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC HRHDPDGCCALRKTEPLQKALVGSNGWITGRKRYQSGQRAALEHFEIEAQTGRIKVNPLA CCCCCCCCEECCCCCHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHEEEECCCEEEECEEE YWQAGDVADYITENRLPRHPLVAQGYPSIGCAPCTSPVQSGEDARAGRWRNTEKDECGIH EECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEE FVNGKVVRQGDMK EECCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]