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The map label for this gene is 110680153

Identifier: 110680153

GI number: 110680153

Start: 2832887

End: 2834395

Strand: Direct

Name: 110680153

Synonym: RD1_2953

Alternate gene names: NA

Gene position: 2832887-2834395 (Clockwise)

Preceding gene: 110680148

Following gene: 110680154

Centisome position: 68.54

GC content: 60.11

Gene sequence:

>1509_bases
GTGACAGATCAGGATCACCTCGACCGCATCAACGCGCTTACGGCCAACGCGCGCACCACCTGGTTTGCGCTGCTTGCAGC
CCTCGCCTTTGTGGGCATTACGCTGATGGGCGTCAAACACATCGACTTTTACGGTGCCGACCGCGCCACCGCCTTGCCGG
TGGTCAATGTCGAAGTGCCCACACGCTTTTTCTTTGTCGCAGCCCCCATTCTGGTGACCGCCATCTATGGCTACTTCCAC
CTCTACCTGATCCGCCTCTGGGACGCGCTGGGGGCTGCCCCTGCCCGGCTCAACGGTATTCGCCTTGGCGATGCCATCAC
GCCTTGGCTGGTCAGCGACGCCGCCTTGCATTTCCGCTGTCGGCTGCGGCGGGACAACGCCGCGACCCCCAGAGCACTTG
AAGGCGGTGCGATGCTGCTGAACTTCCTGCTCGCATGGGGGTTCGGTTTGATCATCCTCTTTTTCACCTGGCAACTCTCC
ATGCCCGCGCGCAGTTTTTGGATGACGGGCATCGCGGCGGCAGCCTTCGGCGTGTCGATCATCGCGGGCGCCTCAAGCAT
GGCCATGATGGCGCGCCGCATGCGCAAACCACCCGACGCAGACCCACCAACCCTATGGGCCACTTGGGTTCAGGCGTTCG
GGCTGGCGATCGGCGTCGCAGCGCTGCTGTGGTTCAGCCACCAGAAAACACAAGGATCGTCAGATCACCTTGCACCCCTG
AATTTGCTGGGTGAGGAAATCGTCGAACGCCCGGCGGGATGGCTGTCCTATGACGATGCGCGCGCTGAATTTCGCGCCAT
GTGGTGTCGTCGGGAATCCGTCGGGAACTGCAGTGATCTGGGGCCGCGCGAGGCTGAGTTTGCCGCCGAGTTTGACCGCC
GTCGCGGGTCAGAGATCGCGGACCTGCGGCGCGCTGGCTGGATACGGTTCAATACAACCGGCCTCAATCTCAGAAGAGCG
GAACTGAGCTACAGCTTTCTGGTGGGCGCGCACCTATGGCAGGCAAATCTGCAGGAGGCTTCTCTCCTTTGGTCAGATCT
GGAGCGCGCGTATCTGGCCGAGGCCAATTTTGCGGGCGCCGATATGAGATATATGCAGCTTTACGGCGCGAATCTGAGTT
TTTCCCAAATGGCCAGCGGTGCCAACCCGCTGTCCGGCAGCCTGTTTGGCACTGATCTCAGAAGTACCGCAAACCACGGA
GGCATGCTCAGGTCCGTTGACATGCGGGGCGTGCTGTTCAATGCGGCGACAGATTTCAGGAATAGTTTTCTGGATGGCAG
CGTTCTTGTGACACAAGAGTTCCGCACCCATATGGGCGATCCGTGTCAATGGGTGAAAGGTCGGTTGGATGACCTTGAAT
TCTATGGCCGCTGGCGTGGCTGGATAGAGGCAATGCCGGAATGGATGATAAAGGTGCAATGGGATGAGATTGCCCCCGAC
GCCTTCAGGGACATTACCGCGATTGCGCCCCCCGAGGGCTGCGAATGGCAATACGAAACTTCGGAATAA

Upstream 100 bases:

>100_bases
TCATCCGGTCCGTTTGCCGCAAATTTCCCTTCGTTCCAAGCCCTTGATTAATGGCTGCACCCATTCCACAGTCGCCTTAT
AAAAAGCCAAAGGTCAGACC

Downstream 100 bases:

>100_bases
TCAGCAGCGGCGTTAAAAAATATTTCAATTCTTGCATTTAACTCCGGCGATGCGCACATCTGAGGAGCGTTTTAAAAAAG
GACAGCCGGCATGGATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MTDQDHLDRINALTANARTTWFALLAALAFVGITLMGVKHIDFYGADRATALPVVNVEVPTRFFFVAAPILVTAIYGYFH
LYLIRLWDALGAAPARLNGIRLGDAITPWLVSDAALHFRCRLRRDNAATPRALEGGAMLLNFLLAWGFGLIILFFTWQLS
MPARSFWMTGIAAAAFGVSIIAGASSMAMMARRMRKPPDADPPTLWATWVQAFGLAIGVAALLWFSHQKTQGSSDHLAPL
NLLGEEIVERPAGWLSYDDARAEFRAMWCRRESVGNCSDLGPREAEFAAEFDRRRGSEIADLRRAGWIRFNTTGLNLRRA
ELSYSFLVGAHLWQANLQEASLLWSDLERAYLAEANFAGADMRYMQLYGANLSFSQMASGANPLSGSLFGTDLRSTANHG
GMLRSVDMRGVLFNAATDFRNSFLDGSVLVTQEFRTHMGDPCQWVKGRLDDLEFYGRWRGWIEAMPEWMIKVQWDEIAPD
AFRDITAIAPPEGCEWQYETSE

Sequences:

>Translated_502_residues
MTDQDHLDRINALTANARTTWFALLAALAFVGITLMGVKHIDFYGADRATALPVVNVEVPTRFFFVAAPILVTAIYGYFH
LYLIRLWDALGAAPARLNGIRLGDAITPWLVSDAALHFRCRLRRDNAATPRALEGGAMLLNFLLAWGFGLIILFFTWQLS
MPARSFWMTGIAAAAFGVSIIAGASSMAMMARRMRKPPDADPPTLWATWVQAFGLAIGVAALLWFSHQKTQGSSDHLAPL
NLLGEEIVERPAGWLSYDDARAEFRAMWCRRESVGNCSDLGPREAEFAAEFDRRRGSEIADLRRAGWIRFNTTGLNLRRA
ELSYSFLVGAHLWQANLQEASLLWSDLERAYLAEANFAGADMRYMQLYGANLSFSQMASGANPLSGSLFGTDLRSTANHG
GMLRSVDMRGVLFNAATDFRNSFLDGSVLVTQEFRTHMGDPCQWVKGRLDDLEFYGRWRGWIEAMPEWMIKVQWDEIAPD
AFRDITAIAPPEGCEWQYETSE
>Mature_501_residues
TDQDHLDRINALTANARTTWFALLAALAFVGITLMGVKHIDFYGADRATALPVVNVEVPTRFFFVAAPILVTAIYGYFHL
YLIRLWDALGAAPARLNGIRLGDAITPWLVSDAALHFRCRLRRDNAATPRALEGGAMLLNFLLAWGFGLIILFFTWQLSM
PARSFWMTGIAAAAFGVSIIAGASSMAMMARRMRKPPDADPPTLWATWVQAFGLAIGVAALLWFSHQKTQGSSDHLAPLN
LLGEEIVERPAGWLSYDDARAEFRAMWCRRESVGNCSDLGPREAEFAAEFDRRRGSEIADLRRAGWIRFNTTGLNLRRAE
LSYSFLVGAHLWQANLQEASLLWSDLERAYLAEANFAGADMRYMQLYGANLSFSQMASGANPLSGSLFGTDLRSTANHGG
MLRSVDMRGVLFNAATDFRNSFLDGSVLVTQEFRTHMGDPCQWVKGRLDDLEFYGRWRGWIEAMPEWMIKVQWDEIAPDA
FRDITAIAPPEGCEWQYETSE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56093; Mature: 55962

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQDHLDRINALTANARTTWFALLAALAFVGITLMGVKHIDFYGADRATALPVVNVEVP
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCC
TRFFFVAAPILVTAIYGYFHLYLIRLWDALGAAPARLNGIRLGDAITPWLVSDAALHFRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCHHHHHHHEEEEE
RLRRDNAATPRALEGGAMLLNFLLAWGFGLIILFFTWQLSMPARSFWMTGIAAAAFGVSI
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IAGASSMAMMARRMRKPPDADPPTLWATWVQAFGLAIGVAALLWFSHQKTQGSSDHLAPL
HHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
NLLGEEIVERPAGWLSYDDARAEFRAMWCRRESVGNCSDLGPREAEFAAEFDRRRGSEIA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
DLRRAGWIRFNTTGLNLRRAELSYSFLVGAHLWQANLQEASLLWSDLERAYLAEANFAGA
HHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DMRYMQLYGANLSFSQMASGANPLSGSLFGTDLRSTANHGGMLRSVDMRGVLFNAATDFR
CHHHHHHCCCCCCHHHHHCCCCCCCCCEECCHHHHHCCCCCEEEEECCCEEEEHHHHHHH
NSFLDGSVLVTQEFRTHMGDPCQWVKGRLDDLEFYGRWRGWIEAMPEWMIKVQWDEIAPD
HHHCCCCEEEEHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEEEHHHCCCH
AFRDITAIAPPEGCEWQYETSE
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDQDHLDRINALTANARTTWFALLAALAFVGITLMGVKHIDFYGADRATALPVVNVEVP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEECCC
TRFFFVAAPILVTAIYGYFHLYLIRLWDALGAAPARLNGIRLGDAITPWLVSDAALHFRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCHHHHHHHEEEEE
RLRRDNAATPRALEGGAMLLNFLLAWGFGLIILFFTWQLSMPARSFWMTGIAAAAFGVSI
EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
IAGASSMAMMARRMRKPPDADPPTLWATWVQAFGLAIGVAALLWFSHQKTQGSSDHLAPL
HHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
NLLGEEIVERPAGWLSYDDARAEFRAMWCRRESVGNCSDLGPREAEFAAEFDRRRGSEIA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHH
DLRRAGWIRFNTTGLNLRRAELSYSFLVGAHLWQANLQEASLLWSDLERAYLAEANFAGA
HHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DMRYMQLYGANLSFSQMASGANPLSGSLFGTDLRSTANHGGMLRSVDMRGVLFNAATDFR
CHHHHHHCCCCCCHHHHHCCCCCCCCCEECCHHHHHCCCCCEEEEECCCEEEEHHHHHHH
NSFLDGSVLVTQEFRTHMGDPCQWVKGRLDDLEFYGRWRGWIEAMPEWMIKVQWDEIAPD
HHHCCCCEEEEHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEEEHHHCCCH
AFRDITAIAPPEGCEWQYETSE
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA