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The map label for this gene is 110680129

Identifier: 110680129

GI number: 110680129

Start: 2807072

End: 2808340

Strand: Reverse

Name: 110680129

Synonym: RD1_2928

Alternate gene names: NA

Gene position: 2808340-2807072 (Counterclockwise)

Preceding gene: 110680130

Following gene: 110680128

Centisome position: 67.95

GC content: 54.61

Gene sequence:

>1269_bases
ATGGCTATTGGACTTGTCTTGGGGGGCGGTGCACCCAACCTTCCGTTGATGTCGGGCGCGCTTTTGGCGCTGGATGACGC
GGGCATTGAATTCGAAGTGGTTTCGACGACCGGCGCAGGCATGCTGATCGGATTGATGTATGCCGCGCCGCGCAACGGCA
CGCGCAAGGAGACGTTGCAGGCGACCCGTGAAATGGGGGTACACGACAGCATCTACAATGTGTTCCCGGTCAATTACAAA
ATCTTTCACAAGGCCGGCCCCATGGCCGAAGTCTATACCAAATTTCACCAGACATGGCTCGCGGCGATGCCCCGCGAGAA
CGAAGCGCAGCGTTTCATGTCGGATATCACGCAATTCTGGGTCGCGGCCTTCTGCCCCAGCGATTTAAATCCCAAGCAAA
ACGGAATGTGCCAGCCGCCACCATGGATTGATCTGGTGGTGGATTTCGACAAGCTGCGCGACTTTGATGGCGAGTTTCTG
ATGTCGGCCTATTGCATTGAGGACGAAGCAGAGGTGAGCTTTTCCAAGGAGGAAATCACCTCCGATCATTTCAAGGCGGC
CCTCGCGATGCCCTTGATTTATGCCCCCTACAAGATGGACGGCAAGACATATCTTGAGGGATCGGCCTTTGACACGCTGG
CCTTCAGTCCGGGCAATGTGATGAGCCGCAATCTGGTCGATACGGTCATCTATTTCGACATCCTCGGCCAGCGAAAGCTG
ATCGCCGAGCCGGAAAACCTCTATGATGCCTGGGTGCATTCCATCATCAACCCGTTGACGCGCATCGCTGAGATGGATTC
GGCAAACTATGAAAGCACGGGCGCGCAGCTTGAAGGTGTCGATGTTTTGCGCATGCCGTTTCGCGACAACATCTCGGATG
AACAATGGCCCAAGGTTCTGGACTGGTCCTATTCGAACATGTCCACCCTGTTTGACATCGGTTATAAAACCGGGACCGAA
TTTGCGCAGAAGCATAAGGCCAAGCTCAAGGCGACCAACGATAAAACTCCCAAGAAGACGATTGAGACGATCGCGCAGAA
GGGCATGGACAAGGAGATGATGGACGTCGTCAAAACGGCCACCAAGAGCGCGGCCCCGACCAAAGGGGCGGTGCTGAAAA
AGGAATTCGAGAAACTGGCCAAGGCCAAGGGCAAGGAAAACGACAAGGATCTGATCACCGCCTTTGCCTATGCGGCGCAG
ATGTTCGAACAATCCTACGGGCCGGAAAAAAGCGCCAAAAAACAATCGACGGCAAGCAAAGACAAATAG

Upstream 100 bases:

>100_bases
TGATGGTTGTTTGGGCACGTATCGTCAAACGGTTGCGCAGGCTTGACAGAAAGCCACGCATGACGGAACGATTGCGCGCA
GCATATTAGGGATATTTTAG

Downstream 100 bases:

>100_bases
AGCGCGCTTTGCTACCCTAAGGGATATAGGGGAAAACCGTTGAGTATAAAAAGGCGCAGCCAAGTGCCGACAGGGGAACG
GACGCATGAGTATTGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAIGLVLGGGAPNLPLMSGALLALDDAGIEFEVVSTTGAGMLIGLMYAAPRNGTRKETLQATREMGVHDSIYNVFPVNYK
IFHKAGPMAEVYTKFHQTWLAAMPRENEAQRFMSDITQFWVAAFCPSDLNPKQNGMCQPPPWIDLVVDFDKLRDFDGEFL
MSAYCIEDEAEVSFSKEEITSDHFKAALAMPLIYAPYKMDGKTYLEGSAFDTLAFSPGNVMSRNLVDTVIYFDILGQRKL
IAEPENLYDAWVHSIINPLTRIAEMDSANYESTGAQLEGVDVLRMPFRDNISDEQWPKVLDWSYSNMSTLFDIGYKTGTE
FAQKHKAKLKATNDKTPKKTIETIAQKGMDKEMMDVVKTATKSAAPTKGAVLKKEFEKLAKAKGKENDKDLITAFAYAAQ
MFEQSYGPEKSAKKQSTASKDK

Sequences:

>Translated_422_residues
MAIGLVLGGGAPNLPLMSGALLALDDAGIEFEVVSTTGAGMLIGLMYAAPRNGTRKETLQATREMGVHDSIYNVFPVNYK
IFHKAGPMAEVYTKFHQTWLAAMPRENEAQRFMSDITQFWVAAFCPSDLNPKQNGMCQPPPWIDLVVDFDKLRDFDGEFL
MSAYCIEDEAEVSFSKEEITSDHFKAALAMPLIYAPYKMDGKTYLEGSAFDTLAFSPGNVMSRNLVDTVIYFDILGQRKL
IAEPENLYDAWVHSIINPLTRIAEMDSANYESTGAQLEGVDVLRMPFRDNISDEQWPKVLDWSYSNMSTLFDIGYKTGTE
FAQKHKAKLKATNDKTPKKTIETIAQKGMDKEMMDVVKTATKSAAPTKGAVLKKEFEKLAKAKGKENDKDLITAFAYAAQ
MFEQSYGPEKSAKKQSTASKDK
>Mature_421_residues
AIGLVLGGGAPNLPLMSGALLALDDAGIEFEVVSTTGAGMLIGLMYAAPRNGTRKETLQATREMGVHDSIYNVFPVNYKI
FHKAGPMAEVYTKFHQTWLAAMPRENEAQRFMSDITQFWVAAFCPSDLNPKQNGMCQPPPWIDLVVDFDKLRDFDGEFLM
SAYCIEDEAEVSFSKEEITSDHFKAALAMPLIYAPYKMDGKTYLEGSAFDTLAFSPGNVMSRNLVDTVIYFDILGQRKLI
AEPENLYDAWVHSIINPLTRIAEMDSANYESTGAQLEGVDVLRMPFRDNISDEQWPKVLDWSYSNMSTLFDIGYKTGTEF
AQKHKAKLKATNDKTPKKTIETIAQKGMDKEMMDVVKTATKSAAPTKGAVLKKEFEKLAKAKGKENDKDLITAFAYAAQM
FEQSYGPEKSAKKQSTASKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46982; Mature: 46851

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGLVLGGGAPNLPLMSGALLALDDAGIEFEVVSTTGAGMLIGLMYAAPRNGTRKETLQ
CEEEEEECCCCCCCCHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHH
ATREMGVHDSIYNVFPVNYKIFHKAGPMAEVYTKFHQTWLAAMPRENEAQRFMSDITQFW
HHHHCCCCCCHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VAAFCPSDLNPKQNGMCQPPPWIDLVVDFDKLRDFDGEFLMSAYCIEDEAEVSFSKEEIT
HHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHEECCCCCCCCCHHHHH
SDHFKAALAMPLIYAPYKMDGKTYLEGSAFDTLAFSPGNVMSRNLVDTVIYFDILGQRKL
HHHHHHHHHHHHHCCCEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH
IAEPENLYDAWVHSIINPLTRIAEMDSANYESTGAQLEGVDVLRMPFRDNISDEQWPKVL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEECCCCCCCCCHHCCHHH
DWSYSNMSTLFDIGYKTGTEFAQKHKAKLKATNDKTPKKTIETIAQKGMDKEMMDVVKTA
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
TKSAAPTKGAVLKKEFEKLAKAKGKENDKDLITAFAYAAQMFEQSYGPEKSAKKQSTASK
HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
DK
CC
>Mature Secondary Structure 
AIGLVLGGGAPNLPLMSGALLALDDAGIEFEVVSTTGAGMLIGLMYAAPRNGTRKETLQ
EEEEEECCCCCCCCHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHH
ATREMGVHDSIYNVFPVNYKIFHKAGPMAEVYTKFHQTWLAAMPRENEAQRFMSDITQFW
HHHHCCCCCCHHHEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VAAFCPSDLNPKQNGMCQPPPWIDLVVDFDKLRDFDGEFLMSAYCIEDEAEVSFSKEEIT
HHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHHHHEECCCCCCCCCHHHHH
SDHFKAALAMPLIYAPYKMDGKTYLEGSAFDTLAFSPGNVMSRNLVDTVIYFDILGQRKL
HHHHHHHHHHHHHCCCEECCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHH
IAEPENLYDAWVHSIINPLTRIAEMDSANYESTGAQLEGVDVLRMPFRDNISDEQWPKVL
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEECCCCCCCCCHHCCHHH
DWSYSNMSTLFDIGYKTGTEFAQKHKAKLKATNDKTPKKTIETIAQKGMDKEMMDVVKTA
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
TKSAAPTKGAVLKKEFEKLAKAKGKENDKDLITAFAYAAQMFEQSYGPEKSAKKQSTASK
HHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
DK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA