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The map label for this gene is 110680115

Identifier: 110680115

GI number: 110680115

Start: 2789041

End: 2789784

Strand: Direct

Name: 110680115

Synonym: RD1_2912

Alternate gene names: NA

Gene position: 2789041-2789784 (Clockwise)

Preceding gene: 110680111

Following gene: 110680116

Centisome position: 67.48

GC content: 59.27

Gene sequence:

>744_bases
ATGACCGGTGAACAGATCCTTTTCATCGTTCTGGGCGCCGCTGCCGGCGGCTTCATCAACGGGCTTGCCGCCTTTGGCAC
AGCCCTTTTCGCACTGGGGTTCTTTTTGAGCGTGATGACGCCGGTTCAGGCCGTGACCCTGACCGTCACCCTGAGCATTT
TCAGCGGGCTGCAGGGTCTCTGGGTCGTCCGCCATGCCATGCTGGACAACACCGCCCGTCTGGCGCGGTTCATCATACCG
GGCTGCCTCGGGGTGCCATTGGGTGTCTGGTCCCTGCACCTGATTGATGTGAGCCTGCTCAAACTGGTCATTGCCTTCTT
TCTGATCCTCTACGGCGGATACTTCACATGGCGCAGCAACCTGCCGAAAATCCGCGCAAAAACGCCCGTTATTGATGCAA
CAGTCGGGTTTTCGGGCGGTGTGCTTGGCGGGGCCGCATCGCTGTCGGGTGCCTTGCCCACCATGTGGTGTTCCATCCGG
GGTTGGCCGAAAATGGAAACCCGCGCGGTGCTGCAACCCTATAATATGGTCATCCTCACATGCGCTGCCGTCATGCTGGG
TCTGCGCGGCGCCTACACATCGCAAACCCTTGGGTTCCTGGCTCTGGCGATCCCCGTTTCGATCCTGGCAGCCCAGACCG
GCATGATGGTTTTTCGCCGCATAAGCGATGTGTTCTTTCGCAAACTGCTGATCAGCCTGACGCTTGTGTCCGGATGCGCC
CTGTTGATTCGTGAAATCCTCTAG

Upstream 100 bases:

>100_bases
GCCAAGGAGGGCGTGCCGTTCACCGCGCTGGAATGTCCTTTGAACCCTGCATCACCTTTCGCCTTCGCGCCGCTGCGCCA
ATTTCGCGCGCACCAACACC

Downstream 100 bases:

>100_bases
CGTCTGGCGCAGCCATTTGACGCCGATTGTGCCACCACAACGCGGGAAGCCTCTTGCGCCGCGCCTGTCGCTGCGGGACA
ACGGCCCTATGTCTGACGTT

Product: integral membrane protein, putative

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTGEQILFIVLGAAAGGFINGLAAFGTALFALGFFLSVMTPVQAVTLTVTLSIFSGLQGLWVVRHAMLDNTARLARFIIP
GCLGVPLGVWSLHLIDVSLLKLVIAFFLILYGGYFTWRSNLPKIRAKTPVIDATVGFSGGVLGGAASLSGALPTMWCSIR
GWPKMETRAVLQPYNMVILTCAAVMLGLRGAYTSQTLGFLALAIPVSILAAQTGMMVFRRISDVFFRKLLISLTLVSGCA
LLIREIL

Sequences:

>Translated_247_residues
MTGEQILFIVLGAAAGGFINGLAAFGTALFALGFFLSVMTPVQAVTLTVTLSIFSGLQGLWVVRHAMLDNTARLARFIIP
GCLGVPLGVWSLHLIDVSLLKLVIAFFLILYGGYFTWRSNLPKIRAKTPVIDATVGFSGGVLGGAASLSGALPTMWCSIR
GWPKMETRAVLQPYNMVILTCAAVMLGLRGAYTSQTLGFLALAIPVSILAAQTGMMVFRRISDVFFRKLLISLTLVSGCA
LLIREIL
>Mature_246_residues
TGEQILFIVLGAAAGGFINGLAAFGTALFALGFFLSVMTPVQAVTLTVTLSIFSGLQGLWVVRHAMLDNTARLARFIIPG
CLGVPLGVWSLHLIDVSLLKLVIAFFLILYGGYFTWRSNLPKIRAKTPVIDATVGFSGGVLGGAASLSGALPTMWCSIRG
WPKMETRAVLQPYNMVILTCAAVMLGLRGAYTSQTLGFLALAIPVSILAAQTGMMVFRRISDVFFRKLLISLTLVSGCAL
LIREIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26401; Mature: 26270

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEQILFIVLGAAAGGFINGLAAFGTALFALGFFLSVMTPVQAVTLTVTLSIFSGLQGL
CCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WVVRHAMLDNTARLARFIIPGCLGVPLGVWSLHLIDVSLLKLVIAFFLILYGGYFTWRSN
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCC
LPKIRAKTPVIDATVGFSGGVLGGAASLSGALPTMWCSIRGWPKMETRAVLQPYNMVILT
CCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHCHHHHHHHH
CAAVMLGLRGAYTSQTLGFLALAIPVSILAAQTGMMVFRRISDVFFRKLLISLTLVSGCA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIREIL
HHHHHHC
>Mature Secondary Structure 
TGEQILFIVLGAAAGGFINGLAAFGTALFALGFFLSVMTPVQAVTLTVTLSIFSGLQGL
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
WVVRHAMLDNTARLARFIIPGCLGVPLGVWSLHLIDVSLLKLVIAFFLILYGGYFTWRSN
HHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCC
LPKIRAKTPVIDATVGFSGGVLGGAASLSGALPTMWCSIRGWPKMETRAVLQPYNMVILT
CCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHCCCCCCHHHHHHHCHHHHHHHH
CAAVMLGLRGAYTSQTLGFLALAIPVSILAAQTGMMVFRRISDVFFRKLLISLTLVSGCA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIREIL
HHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA