| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is cysU [C]
Identifier: 110680114
GI number: 110680114
Start: 2788110
End: 2788832
Strand: Reverse
Name: cysU [C]
Synonym: RD1_2911
Alternate gene names: 110680114
Gene position: 2788832-2788110 (Counterclockwise)
Preceding gene: 110680119
Following gene: 110680113
Centisome position: 67.48
GC content: 61.0
Gene sequence:
>723_bases ATGGGCTTTCCGCATCTGATGAACGATATTTTCGAAGGCCTGTCCGCCGCTTTCTGGCTTGTAGTGACGCTTGACCCGGA CCTTGTTGAAATCAGCCTGCGCTCTCTGGAGGTCACGTTGACCGCTCTGGTGATCGGGTCGGCTATTGCGCTGCCGCTGG GGACGTTTCTGGCCATCCGTCGATTTCGTTACCGGCGTCTGGTGATTTCGCTGCTCAATGCGCTGATGGGCCTGCCGCCG GTGGTGGTCGGGCTGGTCGTTTACATCCTGCTGTCGCGGTCCGGGCCTTTCGGGGTGTTGGGTCTGTTGTTCACACCCAC GGCCATGATCATTGCACAGGTGATAATCATCACGCCGCTGATCGCCTCGATCACCCATCAGGCGATGCGCGAGTTATGGG CGCAGTACCATGATTTGCTGATTTCGCTCGACACATCGCAGTGGCAGCGGGTCAAGACGCTGATCTGGGATGGACGGCGC AATCTGCTCACGGCGTCGCTGGCCGGTTTCGGGCGCGGCATCGGCGAGGTCGGTGCGATCATGATCGTCGGCGGGAACAT CGATCACGCCACGCGGGTGCTGACCACGGCCATCGCTCTCGAGACCGGCAAGGGGGATTTTGCCCTCGCGCTGGCGCTTG GATTTGTGCTGATCGCGCTGGCCATCGGGGTCAATATCGCCATTCACTGGTTGTCGCGGACGGAGCGTGAGGGGCGATGG TGA
Upstream 100 bases:
>100_bases GGAGGCTGTGAAAGCGCATATGAAAAAACTGCCCGGCGGGTGGGGGCGAATGATTGCAGTCTCGCGGCGCATATCTTAGT CTCGCCGGACCGAAGCGAGC
Downstream 100 bases:
>100_bases TGTCTATCCTGCCACTGGTGCTGAAAGACGTCTTTGTGCGACGGCGTGGAAAGCGGTTGCTCGGGCCGGTCAGCCTGTCG CTCGCGCCGGGCGGTTGCAC
Product: tungstate ABC transporter, permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; TUNGstate ABC Transporter Permease Protein; ABC-Type TUNGstate Transport System Periplasmic Component; Permease Component Of ABC Transporter; Permease Component Of TUNGstate ABC Transporter; Sulfate/TUNGstate ABC Transporter Permease; Molybdenum Transport System Permease Protein ModB; Sulfate Transport System Permease Protein; NifC-Like ABC-Type Porter; TUNGsten Transporter Permease Protein; Molybdate ABC Transporter Permease ModB; ABC-Type Transport System Permease Subunit; Anion ABC Transporter Permease; TUNGstate ABC Transporter Permease; ABC-Type TUNGstate Transport Permease Protein; ABC TUNGstate Transporter Periplasmic Component; ABC-Type Transport System Permease Component; TUNGstate Permease; Sulfate/TUNGstate Uptake Family ABC Transporter Permease; ATP Synthase F0 A Subunit; TUNGstate/Sulfate ABC Transporter Permease; ABC-Type Transporter Protein Periplasmic Component; ABC-Type TUNGstate Transport System Permease; Basic Organic Compound ABC-Transporter; TUNGstate ABC Transporter Membrane Protein; Anion-Uptake ABC-Transport System Permease; Molybdenum ABC Transporter Permease Protein; TUNGstate ABC Transporter Permease Protein TupB; ABC-Type Sulfate Transport System Permease Component
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGFPHLMNDIFEGLSAAFWLVVTLDPDLVEISLRSLEVTLTALVIGSAIALPLGTFLAIRRFRYRRLVISLLNALMGLPP VVVGLVVYILLSRSGPFGVLGLLFTPTAMIIAQVIIITPLIASITHQAMRELWAQYHDLLISLDTSQWQRVKTLIWDGRR NLLTASLAGFGRGIGEVGAIMIVGGNIDHATRVLTTAIALETGKGDFALALALGFVLIALAIGVNIAIHWLSRTEREGRW
Sequences:
>Translated_240_residues MGFPHLMNDIFEGLSAAFWLVVTLDPDLVEISLRSLEVTLTALVIGSAIALPLGTFLAIRRFRYRRLVISLLNALMGLPP VVVGLVVYILLSRSGPFGVLGLLFTPTAMIIAQVIIITPLIASITHQAMRELWAQYHDLLISLDTSQWQRVKTLIWDGRR NLLTASLAGFGRGIGEVGAIMIVGGNIDHATRVLTTAIALETGKGDFALALALGFVLIALAIGVNIAIHWLSRTEREGRW >Mature_239_residues GFPHLMNDIFEGLSAAFWLVVTLDPDLVEISLRSLEVTLTALVIGSAIALPLGTFLAIRRFRYRRLVISLLNALMGLPPV VVGLVVYILLSRSGPFGVLGLLFTPTAMIIAQVIIITPLIASITHQAMRELWAQYHDLLISLDTSQWQRVKTLIWDGRRN LLTASLAGFGRGIGEVGAIMIVGGNIDHATRVLTTAIALETGKGDFALALALGFVLIALAIGVNIAIHWLSRTEREGRW
Specific function: Part Of The Abc Transporter Complex Cysawtp (Tc 3.A.1.6.1) Involved In Sulfate/Thiosulfate Import. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788764, Length=209, Percent_Identity=24.8803827751196, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26130; Mature: 25998
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFPHLMNDIFEGLSAAFWLVVTLDPDLVEISLRSLEVTLTALVIGSAIALPLGTFLAIR CCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRYRRLVISLLNALMGLPPVVVGLVVYILLSRSGPFGVLGLLFTPTAMIIAQVIIITPL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH IASITHQAMRELWAQYHDLLISLDTSQWQRVKTLIWDGRRNLLTASLAGFGRGIGEVGAI HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCEE MIVGGNIDHATRVLTTAIALETGKGDFALALALGFVLIALAIGVNIAIHWLSRTEREGRW EEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GFPHLMNDIFEGLSAAFWLVVTLDPDLVEISLRSLEVTLTALVIGSAIALPLGTFLAIR CCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFRYRRLVISLLNALMGLPPVVVGLVVYILLSRSGPFGVLGLLFTPTAMIIAQVIIITPL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH IASITHQAMRELWAQYHDLLISLDTSQWQRVKTLIWDGRRNLLTASLAGFGRGIGEVGAI HHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCEE MIVGGNIDHATRVLTTAIALETGKGDFALALALGFVLIALAIGVNIAIHWLSRTEREGRW EEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA