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The map label for this gene is glpR [H]

Identifier: 110680089

GI number: 110680089

Start: 2763165

End: 2763926

Strand: Direct

Name: glpR [H]

Synonym: RD1_2885

Alternate gene names: 110680089

Gene position: 2763165-2763926 (Clockwise)

Preceding gene: 110680074

Following gene: 110680096

Centisome position: 66.85

GC content: 59.71

Gene sequence:

>762_bases
ATGACACAAAACTTCCGGCACGCCGACATCCTGAACATCGCGCAAAAAGAAGGCAAAGTAACCGTAGATGACCTTGCAGA
CCGGTTCGGCGTCACCCTCCAGACCATCCGCCGGGATCTGACCGAACTGGCAGCAGACAGAAAGCTGGAACGCGTGCATG
GCGGCGCGGTCTTGCCCTCGGGCACCACGAACATCGAATATGATGAAAGACGCCGCCTGAACGCCGATGCCAAGACATCA
ATCGCCCGCGCCTGTGCGGCACGTATCGACGATGGCAGTTCGGTGTTTCTGAACATCGGCACCACCACCGAAGCCGTGGC
CCAGCACCTGCTGGATCACCGGAACCTGATGGTTGTGACCAACAACATGAACGTGGCCAGCATCATGGGACACAACGCCA
ACAGCCGGACGATTGTGACCGGTGGCGCACTGCGACGCAGCGATGGTGGCCTGATCGGCCATGTGGCGGTTGAAACCATA
CGCCAGTTCAAATTCGACATCTCGGTGATCGGATGCTCGGCGCTGGATGTGTCCGGCGACCTGCTGGATTTCGATGTCGA
AGAAGTCAGCGTCAGCCGTGCCATCATAGCGCAATCGCGCAAATGCTATCTGGTCGCTGACCATTCGAAACTCAGCCGCT
CCGCCCCTGTGCGAATTGCCGCGCTGCACTCGCTGACAGGTGTTTTCACGGATGCGCCCTTCCCGCCCGTGCTCGCGCAG
CGCTGCGCCGATTGGGGGGTTGAGGTGATCCTGACCGATTGA

Upstream 100 bases:

>100_bases
TACAAAAGAGAGAAAACGAACAATTTCGATCCATCGTCCTTGGCGCATAATCGGCACGACGATCCGCGATTGAGGCCAGC
AAAGGCACAGAACAGCACCG

Downstream 100 bases:

>100_bases
ACACGACCGCACAGATCAGCACCCAGCCGTTGCGATGTCGCAAGCAAGCCCCTGCGTTGGTCCTGCGCGAGCGCTGCGGC
ATCTCCACGGCAAACCGCAG

Product: glycerol-3-phosphate regulon repressor, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTQNFRHADILNIAQKEGKVTVDDLADRFGVTLQTIRRDLTELAADRKLERVHGGAVLPSGTTNIEYDERRRLNADAKTS
IARACAARIDDGSSVFLNIGTTTEAVAQHLLDHRNLMVVTNNMNVASIMGHNANSRTIVTGGALRRSDGGLIGHVAVETI
RQFKFDISVIGCSALDVSGDLLDFDVEEVSVSRAIIAQSRKCYLVADHSKLSRSAPVRIAALHSLTGVFTDAPFPPVLAQ
RCADWGVEVILTD

Sequences:

>Translated_253_residues
MTQNFRHADILNIAQKEGKVTVDDLADRFGVTLQTIRRDLTELAADRKLERVHGGAVLPSGTTNIEYDERRRLNADAKTS
IARACAARIDDGSSVFLNIGTTTEAVAQHLLDHRNLMVVTNNMNVASIMGHNANSRTIVTGGALRRSDGGLIGHVAVETI
RQFKFDISVIGCSALDVSGDLLDFDVEEVSVSRAIIAQSRKCYLVADHSKLSRSAPVRIAALHSLTGVFTDAPFPPVLAQ
RCADWGVEVILTD
>Mature_252_residues
TQNFRHADILNIAQKEGKVTVDDLADRFGVTLQTIRRDLTELAADRKLERVHGGAVLPSGTTNIEYDERRRLNADAKTSI
ARACAARIDDGSSVFLNIGTTTEAVAQHLLDHRNLMVVTNNMNVASIMGHNANSRTIVTGGALRRSDGGLIGHVAVETIR
QFKFDISVIGCSALDVSGDLLDFDVEEVSVSRAIIAQSRKCYLVADHSKLSRSAPVRIAALHSLTGVFTDAPFPPVLAQR
CADWGVEVILTD

Specific function: Repressor of the glycerol-3-phosphate regulon [H]

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=251, Percent_Identity=43.0278884462151, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI87082344, Length=251, Percent_Identity=37.8486055776892, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1789059, Length=248, Percent_Identity=31.8548387096774, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788069, Length=243, Percent_Identity=29.6296296296296, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789519, Length=249, Percent_Identity=29.718875502008, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI226510968, Length=231, Percent_Identity=32.034632034632, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1790753, Length=249, Percent_Identity=28.1124497991968, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789170, Length=229, Percent_Identity=26.2008733624454, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787540, Length=230, Percent_Identity=24.7826086956522, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787063, Length=230, Percent_Identity=24.7826086956522, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790635, Length=150, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 27431; Mature: 27300

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNFRHADILNIAQKEGKVTVDDLADRFGVTLQTIRRDLTELAADRKLERVHGGAVLPS
CCCCCCCHHHHHHHHHCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GTTNIEYDERRRLNADAKTSIARACAARIDDGSSVFLNIGTTTEAVAQHLLDHRNLMVVT
CCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE
NNMNVASIMGHNANSRTIVTGGALRRSDGGLIGHVAVETIRQFKFDISVIGCSALDVSGD
CCCCEEEEECCCCCCCEEEECCCEEECCCCEEHHHHHHHHHHHHHEEEEEEEEEEECCCC
LLDFDVEEVSVSRAIIAQSRKCYLVADHSKLSRSAPVRIAALHSLTGVFTDAPFPPVLAQ
EEECCHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHH
RCADWGVEVILTD
HHHCCCEEEEEEC
>Mature Secondary Structure 
TQNFRHADILNIAQKEGKVTVDDLADRFGVTLQTIRRDLTELAADRKLERVHGGAVLPS
CCCCCCHHHHHHHHHCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCC
GTTNIEYDERRRLNADAKTSIARACAARIDDGSSVFLNIGTTTEAVAQHLLDHRNLMVVT
CCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE
NNMNVASIMGHNANSRTIVTGGALRRSDGGLIGHVAVETIRQFKFDISVIGCSALDVSGD
CCCCEEEEECCCCCCCEEEECCCEEECCCCEEHHHHHHHHHHHHHEEEEEEEEEEECCCC
LLDFDVEEVSVSRAIIAQSRKCYLVADHSKLSRSAPVRIAALHSLTGVFTDAPFPPVLAQ
EEECCHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCEEEEEHHHHHHHHCCCCCCHHHHH
RCADWGVEVILTD
HHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8955387; 3045764; 9278503 [H]