| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is ilvH [H]
Identifier: 110680020
GI number: 110680020
Start: 2683020
End: 2683580
Strand: Direct
Name: ilvH [H]
Synonym: RD1_2813
Alternate gene names: 110680020
Gene position: 2683020-2683580 (Clockwise)
Preceding gene: 110680019
Following gene: 110680022
Centisome position: 64.92
GC content: 59.71
Gene sequence:
>561_bases ATGTCCCCCCTAAAAATCAAAAAAGGCTCCAACAGCCATTCCGCCTATAACCTGCGCCCCACATTCTCGGATGTGGTCGA ACGGCACACGCTGGCCGTTCTGGTGGAAAACGAACCGGGTGTGCTGGCGCGCGTCATCGGGCTTTTCTCTGGCCGTGGCT ACAACATCGACAGCCTGACGGTCGCGGAAGTGGATCACACCGGGCACCTCAGCCGCATCACCATCGTGACCTCCGGCACG CCACAGGTGATCGAGCAGATCAAGGCGCAGCTTGGACGCATTGTCTCGGTGCACGACGTGCATGATCTGACGGTCGAGGG GAAAAGCGTGGAACGCGAGTTGGCCATGTTCAAAGTCGTAGGCCAGGGCGACAAACGGGTCGAGGCCTTACGTCTTGCCG ATATCTTCCGCGCCAATGTGGTCGACAGCACCCTCGAAAGTTTCGTGTTTGAAATCACCGGTGCGCCCGAGAAAATTGAT GCATTTGCTGATCTGATGCGCCCGCTGGGCTTGGCAGAGGTCGCGCGCACCGGGGTCGCGGCCTTGTCCCGCGGGGAATA G
Upstream 100 bases:
>100_bases AGTGGTCAATTGGATTGAAGTCACTGCAACCCGGCGAAGAGTTAGCGAGTTGATGAACGAAAACAATGATGATGATGTCT AACAAAGTTCAGGATCGACA
Downstream 100 bases:
>100_bases GGTCGAAACCCGATACCTTATGAACAGGCCACCTTGGCCTGTTCTGTCCACGGTGAAAAACTCACCACCTGCCCTCTTCT GCGCGCGCTCGGCGTTTTGG
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSPLKIKKGSNSHSAYNLRPTFSDVVERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITIVTSGT PQVIEQIKAQLGRIVSVHDVHDLTVEGKSVERELAMFKVVGQGDKRVEALRLADIFRANVVDSTLESFVFEITGAPEKID AFADLMRPLGLAEVARTGVAALSRGE
Sequences:
>Translated_186_residues MSPLKIKKGSNSHSAYNLRPTFSDVVERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITIVTSGT PQVIEQIKAQLGRIVSVHDVHDLTVEGKSVERELAMFKVVGQGDKRVEALRLADIFRANVVDSTLESFVFEITGAPEKID AFADLMRPLGLAEVARTGVAALSRGE >Mature_185_residues SPLKIKKGSNSHSAYNLRPTFSDVVERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITIVTSGTP QVIEQIKAQLGRIVSVHDVHDLTVEGKSVERELAMFKVVGQGDKRVEALRLADIFRANVVDSTLESFVFEITGAPEKIDA FADLMRPLGLAEVARTGVAALSRGE
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=160, Percent_Identity=46.875, Blast_Score=126, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319837, Length=207, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 20157; Mature: 20026
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLKIKKGSNSHSAYNLRPTFSDVVERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLT CCCCCCCCCCCCCCEEECCCCHHHHHHHCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEE VAEVDHTGHLSRITIVTSGTPQVIEQIKAQLGRIVSVHDVHDLTVEGKSVERELAMFKVV EEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHH GQGDKRVEALRLADIFRANVVDSTLESFVFEITGAPEKIDAFADLMRPLGLAEVARTGVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH ALSRGE HHCCCC >Mature Secondary Structure SPLKIKKGSNSHSAYNLRPTFSDVVERHTLAVLVENEPGVLARVIGLFSGRGYNIDSLT CCCCCCCCCCCCCEEECCCCHHHHHHHCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEE VAEVDHTGHLSRITIVTSGTPQVIEQIKAQLGRIVSVHDVHDLTVEGKSVERELAMFKVV EEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCEEEEECCEEEEECCCHHHHHHHHHHHH GQGDKRVEALRLADIFRANVVDSTLESFVFEITGAPEKIDAFADLMRPLGLAEVARTGVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH ALSRGE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]