Click here to switch to the map view.

The map label for this gene is 110680007

Identifier: 110680007

GI number: 110680007

Start: 2666472

End: 2667011

Strand: Reverse

Name: 110680007

Synonym: RD1_2798

Alternate gene names: NA

Gene position: 2667011-2666472 (Counterclockwise)

Preceding gene: 110680008

Following gene: 110680001

Centisome position: 64.53

GC content: 61.3

Gene sequence:

>540_bases
ATGAAAATCCTTATTGATACCTGCGTGCTTTATCCCACGGTGATGCGCGAAATGGTGTTGCAAACGGCGTGCGCGGGGGC
CTTCACCCCGCTCTGGTCCGCCCGTATTCTCGAAGAATGGGCGCGCGCGGCGCGTAAACTTGGCCCCGATGGGGAGATGC
AGGCGCGTTCGGAAATTGCGCTTGTGCAAAGGGATTTTCCCGCGGCTTGTGTGACCGTGCCTGAAGGGCTGCGCGCGCGG
CTCTGGCTGCCTGATGAAAACGATATCCATGTTCTGGCCGCTGCCGTGGCCTCATCAGCGGATGCGATCTTGACATTGAA
CGCAAAGGACTTCCCGCGCGCCACGCTGGCGGAGGAGGGGGTGCAGCGCCTCGACCCTGACCGGTTTTTGTATGATCTCT
GGCTGAAGGATCCCGCCGTGGTCGAGGCTGCTGGAAAGCGCGTTCTGGACACAGCCCGTGCGCTGTCCGAGACGGATTGG
ACCATCCGCGCCCTGCTCAAGAAAGCACGCTTGCCTAAAACGGCGAAGGCGCTGTCCTAG

Upstream 100 bases:

>100_bases
TCGCTGATATACACGGGATTTGCAGGACCGGATCATCCGCAGCTGCCACAGCTGGCCGAAAGCGGATATCTGAAGTCCGT
GTTCTTTCAACTGTGATGTG

Downstream 100 bases:

>100_bases
GGCGTTTGACGCGCCGCCACACCCGACCTAGAGCGTCTGACGAAATACCTGAAACATCGAGTATCACGTAACGCGTTGAA
ACCCTTGATTTCAGGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKILIDTCVLYPTVMREMVLQTACAGAFTPLWSARILEEWARAARKLGPDGEMQARSEIALVQRDFPAACVTVPEGLRAR
LWLPDENDIHVLAAAVASSADAILTLNAKDFPRATLAEEGVQRLDPDRFLYDLWLKDPAVVEAAGKRVLDTARALSETDW
TIRALLKKARLPKTAKALS

Sequences:

>Translated_179_residues
MKILIDTCVLYPTVMREMVLQTACAGAFTPLWSARILEEWARAARKLGPDGEMQARSEIALVQRDFPAACVTVPEGLRAR
LWLPDENDIHVLAAAVASSADAILTLNAKDFPRATLAEEGVQRLDPDRFLYDLWLKDPAVVEAAGKRVLDTARALSETDW
TIRALLKKARLPKTAKALS
>Mature_179_residues
MKILIDTCVLYPTVMREMVLQTACAGAFTPLWSARILEEWARAARKLGPDGEMQARSEIALVQRDFPAACVTVPEGLRAR
LWLPDENDIHVLAAAVASSADAILTLNAKDFPRATLAEEGVQRLDPDRFLYDLWLKDPAVVEAAGKRVLDTARALSETDW
TIRALLKKARLPKTAKALS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19767; Mature: 19767

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIDTCVLYPTVMREMVLQTACAGAFTPLWSARILEEWARAARKLGPDGEMQARSEIA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVQRDFPAACVTVPEGLRARLWLPDENDIHVLAAAVASSADAILTLNAKDFPRATLAEEG
HHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
VQRLDPDRFLYDLWLKDPAVVEAAGKRVLDTARALSETDWTIRALLKKARLPKTAKALS
HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MKILIDTCVLYPTVMREMVLQTACAGAFTPLWSARILEEWARAARKLGPDGEMQARSEIA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVQRDFPAACVTVPEGLRARLWLPDENDIHVLAAAVASSADAILTLNAKDFPRATLAEEG
HHHCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
VQRLDPDRFLYDLWLKDPAVVEAAGKRVLDTARALSETDWTIRALLKKARLPKTAKALS
HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA