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The map label for this gene is 110680002

Identifier: 110680002

GI number: 110680002

Start: 2661301

End: 2662164

Strand: Direct

Name: 110680002

Synonym: RD1_2793

Alternate gene names: NA

Gene position: 2661301-2662164 (Clockwise)

Preceding gene: 110679999

Following gene: 110680003

Centisome position: 64.39

GC content: 55.9

Gene sequence:

>864_bases
ATGCGGCAAGAGGTTGACAAGAGCATGAAATTCCAAAGCACGGATGATTACGTTGCAACCGATGATCTGACCGTTGCGGT
CAATGCGGCTGTCACGCTCGAACGCCCCTTGCTCGTTAAAGGCGAACCCGGCACCGGCAAGACCGAACTGGCCCGTCAGG
TGAGCCAGTCACTGGGCCTGCGGATGATTGAATGGAACGTCAAATCGACAACGCGCGCGCAGCAGGGTCTCTATGAATAT
GATGCGGTCAGCCGTCTGCGCGACAGCCAGCTGGGTGATGCGCGCGTACATGATGTCAAGAACTACATCCGCAAGGGCAA
GCTGTGGCAGGCCTTTGAGGCCGAGGAAAAAGTCGTTCTGCTGATCGACGAAGTGGACAAGGCCGACATCGAATTCCCGA
ACGATTTGTTGCAGGAACTCGACAAGATGGAATTCTTTGTCTACGAGACAGGCGAGACCATTTCGGCGCGCCATCGCCCG
ATTGTGATCATCACCTCCAACAATGAAAAAGAGCTGCCGGACGCGTTTCTGCGCCGCTGCTTTTTCCACTATATCCGGTT
TCCAGACCCCGAAACACTGCGCAAGATCGTCGAAGTCCATCACCCCGGCATCAAGGATGCCTTGCTGACCGCCGCACTGA
CGCAGTTTTATGACATCCGCGAACAGGCGGGGCTCAAGAAAAAACCCTCGACCTCCGAAGTGCTGGATTGGCTGAAACTG
CTGCTGGCAGAGGATATGACAGCCGCCGACCTCAAATCTTCAGGCACAAGCGCCCTGCCCAAACTGCATGGCGCTCTGTT
GAAGAATGAACAGGACGTCCATCTGTTTGAACGGCTTGCCTTCATGGCCCGCAGTGGGCGCTAG

Upstream 100 bases:

>100_bases
TCCTTTGGCCGAGATGCCCCTCACGCGAGCATCTACCCCACAGACTGCGAATTGTCACTACACAATCGCTTGGATATCTG
TCTAAAAGGACCTGAGAAAA

Downstream 100 bases:

>100_bases
CCCGTAACCCCTGAAATTCCGCTCGAAACGGCAATTCCTTCCGGTTAGCCTGTGCGCAGCCGGCGGCGCAAGGGCCGCTG
CACCCGAGCAATAGGCAGCG

Product: ATPase, AAA family protein, putative

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; ATPase AAA Family Protein; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase-Like Protein; ATPase Associated With Various Cellular Activities; MoxR Family ATPase; Carbon Monoxide Dehydrogenase D Protein; Aaa ATPase; ATPase Associated With Various Cellular; Chaperone ClpB; ClpA/ClpB Family Protein; Oxidoreductase; ATP-Dependent Protease; ATPase Aaa Family; AAA ATPase Central RegionATPase; AAA ATPase Family Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATPase Protein; ATP-Dependent Protease Subunit

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRQEVDKSMKFQSTDDYVATDDLTVAVNAAVTLERPLLVKGEPGTGKTELARQVSQSLGLRMIEWNVKSTTRAQQGLYEY
DAVSRLRDSQLGDARVHDVKNYIRKGKLWQAFEAEEKVVLLIDEVDKADIEFPNDLLQELDKMEFFVYETGETISARHRP
IVIITSNNEKELPDAFLRRCFFHYIRFPDPETLRKIVEVHHPGIKDALLTAALTQFYDIREQAGLKKKPSTSEVLDWLKL
LLAEDMTAADLKSSGTSALPKLHGALLKNEQDVHLFERLAFMARSGR

Sequences:

>Translated_287_residues
MRQEVDKSMKFQSTDDYVATDDLTVAVNAAVTLERPLLVKGEPGTGKTELARQVSQSLGLRMIEWNVKSTTRAQQGLYEY
DAVSRLRDSQLGDARVHDVKNYIRKGKLWQAFEAEEKVVLLIDEVDKADIEFPNDLLQELDKMEFFVYETGETISARHRP
IVIITSNNEKELPDAFLRRCFFHYIRFPDPETLRKIVEVHHPGIKDALLTAALTQFYDIREQAGLKKKPSTSEVLDWLKL
LLAEDMTAADLKSSGTSALPKLHGALLKNEQDVHLFERLAFMARSGR
>Mature_287_residues
MRQEVDKSMKFQSTDDYVATDDLTVAVNAAVTLERPLLVKGEPGTGKTELARQVSQSLGLRMIEWNVKSTTRAQQGLYEY
DAVSRLRDSQLGDARVHDVKNYIRKGKLWQAFEAEEKVVLLIDEVDKADIEFPNDLLQELDKMEFFVYETGETISARHRP
IVIITSNNEKELPDAFLRRCFFHYIRFPDPETLRKIVEVHHPGIKDALLTAALTQFYDIREQAGLKKKPSTSEVLDWLKL
LLAEDMTAADLKSSGTSALPKLHGALLKNEQDVHLFERLAFMARSGR

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32707; Mature: 32707

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQEVDKSMKFQSTDDYVATDDLTVAVNAAVTLERPLLVKGEPGTGKTELARQVSQSLGL
CCCHHHHHCCCCCCCCEEECCCEEEEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCC
RMIEWNVKSTTRAQQGLYEYDAVSRLRDSQLGDARVHDVKNYIRKGKLWQAFEAEEKVVL
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEE
LIDEVDKADIEFPNDLLQELDKMEFFVYETGETISARHRPIVIITSNNEKELPDAFLRRC
EEECCCCCCCCCCHHHHHHHHHHEEEEEECCCEECCCCCCEEEEECCCCCCCHHHHHHHH
FFHYIRFPDPETLRKIVEVHHPGIKDALLTAALTQFYDIREQAGLKKKPSTSEVLDWLKL
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LLAEDMTAADLKSSGTSALPKLHGALLKNEQDVHLFERLAFMARSGR
HHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQEVDKSMKFQSTDDYVATDDLTVAVNAAVTLERPLLVKGEPGTGKTELARQVSQSLGL
CCCHHHHHCCCCCCCCEEECCCEEEEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCC
RMIEWNVKSTTRAQQGLYEYDAVSRLRDSQLGDARVHDVKNYIRKGKLWQAFEAEEKVVL
EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEE
LIDEVDKADIEFPNDLLQELDKMEFFVYETGETISARHRPIVIITSNNEKELPDAFLRRC
EEECCCCCCCCCCHHHHHHHHHHEEEEEECCCEECCCCCCEEEEECCCCCCCHHHHHHHH
FFHYIRFPDPETLRKIVEVHHPGIKDALLTAALTQFYDIREQAGLKKKPSTSEVLDWLKL
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LLAEDMTAADLKSSGTSALPKLHGALLKNEQDVHLFERLAFMARSGR
HHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA