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The map label for this gene is dksA [H]

Identifier: 110680001

GI number: 110680001

Start: 2660735

End: 2661157

Strand: Reverse

Name: dksA [H]

Synonym: RD1_2792

Alternate gene names: 110680001

Gene position: 2661157-2660735 (Counterclockwise)

Preceding gene: 110680007

Following gene: 110680000

Centisome position: 64.39

GC content: 57.45

Gene sequence:

>423_bases
ATGAAACAAGAAGTGTTTTTACCGGATGATTACCGTCCGGCCGAAGACGAGCCATTCATGAATGAACGGCAGGTTGAGTA
TTTCAGACGTAAACTGCTGAACTGGCGGGCCGAGCTTTTGGCGGGCAGCAAGGACACGATTGAAGGGCTTCAGGACGGCA
CGCGTAACATTCCCGATGTTGCCGACCGCGCGTCCGAAGAAACAGACCGCGCGCTGGAATTGCGCACACGCGACCGCCAG
CGCAAATTGGTCAGCAAGATCGATGGCGCGCTGCGTCGCATTGATGAGGGCGAGTTCGGATACTGCTCAGTCACGGGCGA
GCCGATCTCTTTGAAGCGGTTGGATGCGCGTCCGATTGCGACCATGAGCCTTGAGGCGCAGGAACGTCATGAGCGCCGCG
AGAAAGTGCATCGCGACGATTGA

Upstream 100 bases:

>100_bases
TGACAATTCGCAGTCTGTGGGGTAGATGCTCGCGTGAGGGGCATCTCGGCCAAAGGACTAGTTAGGTATGGACGACTTGA
ACCACGTTGAGGGGAAGCAA

Downstream 100 bases:

>100_bases
TCATCTGAACGTCGTTTTGTTTTAAATATGCCGGAGCACATGCTTCGGCATTTTTTTTGGAGAAGCTTGCATGACGGGCA
CGGCACTTGTGATCGGGGGC

Product: dnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDVADRASEETDRALELRTRDRQ
RKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIATMSLEAQERHERREKVHRDD

Sequences:

>Translated_140_residues
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDVADRASEETDRALELRTRDRQ
RKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIATMSLEAQERHERREKVHRDD
>Mature_140_residues
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDVADRASEETDRALELRTRDRQ
RKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIATMSLEAQERHERREKVHRDD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=125, Percent_Identity=41.6, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16431; Mature: 16431

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
ADRASEETDRALELRTRDRQRKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCH
TMSLEAQERHERREKVHRDD
HHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKQEVFLPDDYRPAEDEPFMNERQVEYFRRKLLNWRAELLAGSKDTIEGLQDGTRNIPDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
ADRASEETDRALELRTRDRQRKLVSKIDGALRRIDEGEFGYCSVTGEPISLKRLDARPIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCCH
TMSLEAQERHERREKVHRDD
HHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]