| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is guaA
Identifier: 110679988
GI number: 110679988
Start: 2648777
End: 2650345
Strand: Direct
Name: guaA
Synonym: RD1_2778
Alternate gene names: 110679988
Gene position: 2648777-2650345 (Clockwise)
Preceding gene: 110679986
Following gene: 110679989
Centisome position: 64.09
GC content: 59.02
Gene sequence:
>1569_bases ATGAGCACATCTGATCACGACCGCCTTCTTATCATTGATTTCGGCAGCCAGGTGACGCAATTGATTGCGCGTCGCCTGCG TGAGCTGAATGTCTATTGCGAAATTCACCCCTTTAATCTGGTGGATGACGCCTTTCTGGATGCCTTCGGTGCGAAAGCCG TGATCTTCTCGGGGGGGCCCTCTTCTGTTTTCGCCGATGGTGCTCCGATGCCCCCGGCCAGCGTCTTTGAGCGCGGTGTG CCGATCCTGGGCATTTGCTATGGTCAGCAGGTGATGATGCACTGCCTCGGCGGCAAGGTGGAACGCGGGCATGGCACGGC GGAGTTCGGGCGCGCCTATGTCACCCCGACCGCGCAAAAGCTGGACATGCTGCAGGGGTGGTTTGAAACCGATCAGGACC GCGAACAGGTCTGGATGAGTCACGGCGATCACGTCAGCCAGATCGCCCCCGGTTTTGAAGTGTTCGGCACCTCGCCCAAT GCGCCTTTTGCAATCACGGCTGATACAACACGCCATTTCTATGCGGTGCAGTTCCATCCCGAAGTCCACCACACGCCCAA TGGGGCCAGATTATACGAAAATTTTGTGCGGCTGGCCGGTTTCAAAGGCGATTGGACCATGGGTGCCTACCGCGAGGAAG CCATCGCAAAGATTCGCGAACAGGTTGGCAGTGGCCGGGTGATCTGCGCCCTTTCGGGCGGCGTTGACAGTTCGGTCGCC GCCGTTCTGATCCATGAAGCCATCGGGGATCAGCTGACCTGCGTCTATGTGGATCACGGGCTCATGCGCAAAGACGAATC GGCACAGGTCGTCGGCATGTTCCGTGAACACTACAACCTGCCGCTGATCCATGCGGATGAATCGGACCTGTTTCTGGGCA AGCTGGAGGGCGTCAGCGACCCCGAAACCAAGCGCAAAATCATCGGCGGTTTGTTCATCGAGGTTTTCGAGAAATACGCG AAGGAAATCGGCGGTGCCGATTTCCTGGCACAGGGCACGCTCTACCCGGATGTGATCGAATCGGTCAGCTTCTCCGGTGG CCCTTCGGTCACGATCAAATCGCATCACAACGTCGGCGGGCTGCCGGAGCGGATGAACATGCAACTGGTCGAACCGCTGC GCGAACTTTTCAAGGATGAGGTGCGCGCGCTGGGTCACGAGTTGGGCCTGCCTGCAAGCTTCATCGGCCGCCATCCTTTC CCCGGGCCCGGTCTCGCCATCCGCTGCCCCGGCGAGATCACCCGCGAAAAACTCGATATCCTGCGCGAGGCCGATGCCGT CTATATCGACCAGATCCGTAAACACGGGCTCTACGATGAAATCTGGCAGGCCTTTGTGGCGATCCTGCCCGTGCGCACCG TGGGTGTGATGGGCGACGGGCGCACCTATGATTTCGCCTGCGCCCTGCGCGCTGTCACATCCGTGGACGGTATGACCGCT GACTATTATCCCTTCACACATGAGTTTCTCGGAGAGACCGCAACACGCATCATCAACGAGGTGCCCGGCATCAACCGCGT GACCTACGATATCACCTCAAAACCACCCGGCACGATCGAGTGGGAATAA
Upstream 100 bases:
>100_bases ACCTCTCCTTATCATCAATCGTTGAAAAAGAGGCCCCGGCGGCCAAAGCCCCCGCAATCTCAGGCTTGCCACGCCTGCGC AGGCGGCATACTCAGCGCGT
Downstream 100 bases:
>100_bases CCAAACAGGGCCGGGGTTCGATCATCCCGGTTGTACCGGTATGAGCGCGACACTGAAAGCCATGCTGTGGATGTTCGGAT CCATTGCGTCCTTTTCCACG
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MSTSDHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPFNLVDDAFLDAFGAKAVIFSGGPSSVFADGAPMPPASVFERGV PILGICYGQQVMMHCLGGKVERGHGTAEFGRAYVTPTAQKLDMLQGWFETDQDREQVWMSHGDHVSQIAPGFEVFGTSPN APFAITADTTRHFYAVQFHPEVHHTPNGARLYENFVRLAGFKGDWTMGAYREEAIAKIREQVGSGRVICALSGGVDSSVA AVLIHEAIGDQLTCVYVDHGLMRKDESAQVVGMFREHYNLPLIHADESDLFLGKLEGVSDPETKRKIIGGLFIEVFEKYA KEIGGADFLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGHELGLPASFIGRHPF PGPGLAIRCPGEITREKLDILREADAVYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDFACALRAVTSVDGMTA DYYPFTHEFLGETATRIINEVPGINRVTYDITSKPPGTIEWE
Sequences:
>Translated_522_residues MSTSDHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPFNLVDDAFLDAFGAKAVIFSGGPSSVFADGAPMPPASVFERGV PILGICYGQQVMMHCLGGKVERGHGTAEFGRAYVTPTAQKLDMLQGWFETDQDREQVWMSHGDHVSQIAPGFEVFGTSPN APFAITADTTRHFYAVQFHPEVHHTPNGARLYENFVRLAGFKGDWTMGAYREEAIAKIREQVGSGRVICALSGGVDSSVA AVLIHEAIGDQLTCVYVDHGLMRKDESAQVVGMFREHYNLPLIHADESDLFLGKLEGVSDPETKRKIIGGLFIEVFEKYA KEIGGADFLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGHELGLPASFIGRHPF PGPGLAIRCPGEITREKLDILREADAVYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDFACALRAVTSVDGMTA DYYPFTHEFLGETATRIINEVPGINRVTYDITSKPPGTIEWE >Mature_521_residues STSDHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPFNLVDDAFLDAFGAKAVIFSGGPSSVFADGAPMPPASVFERGVP ILGICYGQQVMMHCLGGKVERGHGTAEFGRAYVTPTAQKLDMLQGWFETDQDREQVWMSHGDHVSQIAPGFEVFGTSPNA PFAITADTTRHFYAVQFHPEVHHTPNGARLYENFVRLAGFKGDWTMGAYREEAIAKIREQVGSGRVICALSGGVDSSVAA VLIHEAIGDQLTCVYVDHGLMRKDESAQVVGMFREHYNLPLIHADESDLFLGKLEGVSDPETKRKIIGGLFIEVFEKYAK EIGGADFLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGGLPERMNMQLVEPLRELFKDEVRALGHELGLPASFIGRHPFP GPGLAIRCPGEITREKLDILREADAVYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDFACALRAVTSVDGMTAD YYPFTHEFLGETATRIINEVPGINRVTYDITSKPPGTIEWE
Specific function: Catalyzes the synthesis of GMP from XMP
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain
Homologues:
Organism=Homo sapiens, GI4504035, Length=556, Percent_Identity=35.9712230215827, Blast_Score=275, Evalue=6e-74, Organism=Escherichia coli, GI1788854, Length=519, Percent_Identity=51.8304431599229, Blast_Score=532, Evalue=1e-152, Organism=Caenorhabditis elegans, GI71992717, Length=577, Percent_Identity=35.528596187175, Blast_Score=295, Evalue=3e-80, Organism=Caenorhabditis elegans, GI71992710, Length=577, Percent_Identity=35.528596187175, Blast_Score=295, Evalue=4e-80, Organism=Caenorhabditis elegans, GI133901714, Length=577, Percent_Identity=35.528596187175, Blast_Score=294, Evalue=6e-80, Organism=Saccharomyces cerevisiae, GI6323873, Length=523, Percent_Identity=50.6692160611855, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI281365319, Length=554, Percent_Identity=34.4765342960289, Blast_Score=269, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUAA_ROSDO (Q165N4)
Other databases:
- EMBL: CP000362 - RefSeq: YP_682995.1 - ProteinModelPortal: Q165N4 - SMR: Q165N4 - STRING: Q165N4 - GeneID: 4195529 - GenomeReviews: CP000362_GR - KEGG: rde:RD1_2778 - NMPDR: fig|375451.6.peg.2577 - eggNOG: COG0519 - HOGENOM: HBG391775 - OMA: MKLVEPL - PhylomeDB: Q165N4 - ProtClustDB: PRK00074 - BioCyc: RDEN375451:RD1_2778-MONOMER - HAMAP: MF_00344 - InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR014729 - InterPro: IPR004506 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR00097 - PRINTS: PR00096 - TIGRFAMs: TIGR00884 - TIGRFAMs: TIGR00888
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF03054 tRNA_Me_trans
EC number: =6.3.5.2
Molecular weight: Translated: 57574; Mature: 57443
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 86-86 ACT_SITE 179-179 ACT_SITE 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSDHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPFNLVDDAFLDAFGAKAVIFSGGP CCCCCCCEEEEEECCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCEEEECCCC SSVFADGAPMPPASVFERGVPILGICYGQQVMMHCLGGKVERGHGTAEFGRAYVTPTAQK CCCCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHCCCEECCCCCHHHCCEEECCCHHH LDMLQGWFETDQDREQVWMSHGDHVSQIAPGFEVFGTSPNAPFAITADTTRHFYAVQFHP HHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEEEECC EVHHTPNGARLYENFVRLAGFKGDWTMGAYREEAIAKIREQVGSGRVICALSGGVDSSVA CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH AVLIHEAIGDQLTCVYVDHGLMRKDESAQVVGMFREHYNLPLIHADESDLFLGKLEGVSD HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCC PETKRKIIGGLFIEVFEKYAKEIGGADFLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGG CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCC LPERMNMQLVEPLRELFKDEVRALGHELGLPASFIGRHPFPGPGLAIRCPGEITREKLDI CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCHHHHHHHHHH LREADAVYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDFACALRAVTSVDGMTA HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCC DYYPFTHEFLGETATRIINEVPGINRVTYDITSKPPGTIEWE CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure STSDHDRLLIIDFGSQVTQLIARRLRELNVYCEIHPFNLVDDAFLDAFGAKAVIFSGGP CCCCCCEEEEEECCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCEEEECCCC SSVFADGAPMPPASVFERGVPILGICYGQQVMMHCLGGKVERGHGTAEFGRAYVTPTAQK CCCCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHCCCEECCCCCHHHCCEEECCCHHH LDMLQGWFETDQDREQVWMSHGDHVSQIAPGFEVFGTSPNAPFAITADTTRHFYAVQFHP HHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCEEECCCCCCCEEEEECCCCEEEEEEECC EVHHTPNGARLYENFVRLAGFKGDWTMGAYREEAIAKIREQVGSGRVICALSGGVDSSVA CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH AVLIHEAIGDQLTCVYVDHGLMRKDESAQVVGMFREHYNLPLIHADESDLFLGKLEGVSD HHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCC PETKRKIIGGLFIEVFEKYAKEIGGADFLAQGTLYPDVIESVSFSGGPSVTIKSHHNVGG CHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCC LPERMNMQLVEPLRELFKDEVRALGHELGLPASFIGRHPFPGPGLAIRCPGEITREKLDI CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCHHHHHHHHHH LREADAVYIDQIRKHGLYDEIWQAFVAILPVRTVGVMGDGRTYDFACALRAVTSVDGMTA HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCC DYYPFTHEFLGETATRIINEVPGINRVTYDITSKPPGTIEWE CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA