| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is pgpA [H]
Identifier: 110679978
GI number: 110679978
Start: 2640979
End: 2641473
Strand: Direct
Name: pgpA [H]
Synonym: RD1_2768
Alternate gene names: 110679978
Gene position: 2640979-2641473 (Clockwise)
Preceding gene: 110679977
Following gene: 110679979
Centisome position: 63.9
GC content: 63.43
Gene sequence:
>495_bases ATGAGCGGTCTGGCCAAGATGATCGCCACCGTCCTTGGCGTGGGATATGTGCGCCCTGCCCCCGGCACATGGGGCTCTCT CGTGGCGCTGCCTTGGGCGTGGCTTTTGCATGTGATCGGCGGGTTCCCCCTGTTGTGCCTTGGCGTGGTCGTGGCCTTTG CCAAGGGCTGGTGGGCAACGGGCGTCATGACGAGGGGCGGTGGCGAGCATGATCCGTCGGAAATCGTGGTGGATGAACTG GTCGGACAATGGATCGCGCTGCTGCCGTTGTCTTATGCCGCGTGGTCCATGGGGATGAATATTCTCGTCATGTGGCCCGG CTGGATCGCGGCATTCGCCTTGTTCCGCCTGTTTGATATCTGGAAACCCGGTCCGGTCGGGTGGGCCGATCGGCGCGGGG ACGCGCTGGGTGTGATGCTGGACGATGTGATCGCGGGCCTGCTTGCCGCGCTTGGCGTGCTGCTGCTTGCCGGACTTTAT CACGGGATGATGTGA
Upstream 100 bases:
>100_bases TGTCGCGCATCTCCGTTAAGGCGACCACGTCGGAACGGCTTGGCTTTACCGGCCGTGGTGAGGGGATCGCCTGCATCGCC ACCGCGGCCCTGGTGCGCGC
Downstream 100 bases:
>100_bases GATGACGCTCGCCACTGACTTGCTGCAGGCTGCGAAGTCCAAAAACGTGATGATCGTCACAGCCGAAAGCTGCACGGGCG GCATGGTGGCTGCGGCATTG
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDEL VGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLY HGMM
Sequences:
>Translated_164_residues MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDEL VGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLY HGMM >Mature_163_residues SGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWATGVMTRGGGEHDPSEIVVDELV GQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDIWKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYH GMM
Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=162, Percent_Identity=34.5679012345679, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 17512; Mature: 17381
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWAT CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GVMTRGGGEHDPSEIVVDELVGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDI CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH WKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYHGMM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGLAKMIATVLGVGYVRPAPGTWGSLVALPWAWLLHVIGGFPLLCLGVVVAFAKGWWAT CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GVMTRGGGEHDPSEIVVDELVGQWIALLPLSYAAWSMGMNILVMWPGWIAAFALFRLFDI CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH WKPGPVGWADRRGDALGVMLDDVIAGLLAALGVLLLAGLYHGMM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]