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The map label for this gene is 110679933

Identifier: 110679933

GI number: 110679933

Start: 2587966

End: 2590014

Strand: Direct

Name: 110679933

Synonym: RD1_2716

Alternate gene names: NA

Gene position: 2587966-2590014 (Clockwise)

Preceding gene: 110679932

Following gene: 110679934

Centisome position: 62.62

GC content: 61.35

Gene sequence:

>2049_bases
ATGCGCAATGATCCTCTCGTCGTATTCACGCCCTCAGGTAAACGCGGCCATTTTGAGGTCGGCACACCGATCCTGACCGC
TGCCCGCCAATTGGGCGTTGATCTGGATTCGGTCTGTGGCGGGCGCGGCATCTGTTCAAAATGTCAGATCACCCCAAGCT
ACGGCGAATTTTCCAAACATGGCGTCACCGTACGTGAGGGCGCGCTGTCCGAATGGAACAAGGTCGAACAACGCTACAAG
GACAAACGCGGGTTGATCGACGGGCGCCGACTGGGGTGTCAGGCCACGGTGCAGGGCGATGTGGTGATCGACGTGCCGCC
CGAAAGCCAGGTGCACAAACAGGTCGTGCGCAAACGTGCCGAAGCGCGGGACATTATCCTCGATCCATCGACCAAGCTTT
ACTACGTCGAAGTGGCGGAGCCGGACATGCATGACCCCTCCGGTGATCTGGAACGTCTGCGGGACGCGTTAAGGGATCAA
TGGGAGTTGGAGAACGTCGCAGCGGACCTGCACATCCTGCAAAGCATGCAGCCGATCCTGCGCAAGGGCGACTGGAAGGT
CACGGTTGCCGTCCATCTCGGGGATGCCGAAAACCCGCCGCGCATCATGAACATCTGGCCGGGCTATTACGACGGCACCG
TCTATGGTCTGGCGGTCGATCTTGGCTCAACCACGATTGCGGCGCATCTGTGCGATTTGCAAACCGGCGAGGTGCTGGCC
TCTTCCGGGGTAATGAACCCCCAGATCCGCTTTGGCGAAGACCTGATGAGCCGGGTCAGCTATTCGATGATGAATGCCGG
TGGCGCGGATGAGATGACCGAAGCGGTGCGCGAGGGCATGCGCGCGCTCTTTACCCAGATCGCCGCCGAGGCGCAGATCG
ACAAGGCGCTGATCGTGGATGCGGTTTTTGTCTGCAACCCGGTGATGCACCACCTGTTTCTCGGGATTGATCCCTTTGAG
CTTGGGCAGGCCCCCTTTGCGCTGACCACCAATAACGCGTTGCGCCTGCGCGCCGATGATCTTGATCTGAACATCCACCC
CTCCGCGCGGGTCTATCTGCTGCCTTGCATCGCAGGACATGTGGGGGCCGATGCCGCCGCCGTGGCCCTGTCCGAGGCCC
CGGATAAATCCGACGATCTGGTTTTGGTGGTCGATGTGGGCACCAATGCGGAAATCCTGCTGGGCAACAAGGAAAAGGTG
CTCGCCTGTTCCTCGCCCACCGGACCCGCCTTTGAAGGCGCGCAGATCAGTTCGGGACAGCGCGCCGCCCCCGGTGCGAT
TGAACGTGTCGAAATTGACCCGGTGACCAAGGAGCCGAGGTTCAAGGTCATCGGCTGCGACCTGTGGTCGGATGATCCCG
ATTTCACCAAGGAAGTCGGCCCCTCCGGCATCACCGGGATATGCGGTTCCGGCATCATCGAGATGGTGGCGGAGATGCGC
ATGAACGGCATCGTCGATGCCCCCGGCCTGATCGGCACACCGGAGCAGACCGGAACGCAGCGGTGCTTTCTGGACGGGCG
CACCTATTCCTACCTCGTCTATGACGCCACAGCCGACGGTGGCCCACGGATCACCGTGACAAACCGCGACATTCGCGAAA
TCCAGATGGCCAAGGCAGCGCTATACTCCGGCGCGCGGCTGCTGATGGATAAATTTGGCGTCGATAAGGTTGACCGCGTG
GTGCTGGCCGGTGCTTTCGGGGCGCATATCTCGTCCAAACACGCGATGGTACTTGGCATGATCCCGGATGCACCGCTCGA
CAAGGTGACATCCGCCGGAAATGCGGCAGGCACCGGGGCACGCATCGCACTGCTCAACACAGCCGCACGCGCGGAAATCG
AAGCGACCGTCAGCGCCATCCACAAGATCGAAACCGCGATTGAGCCGCGTTTTCAGGAACATTTCGTCAATGCCTCGGCC
ATCCCGAATGCGGTCGAACCTTTTCCCATCTTGAACTCGATCGTTTCCCTGCCCGAGGCGACATTCAACACGGGCGGCGG
CAGCGAGAGTGACGCAAGGGGCGGACGGCGCAGGCGGCGGCGGGCGTGA

Upstream 100 bases:

>100_bases
GGAATGCCGCGGCTGACGCATCAAATGACGCGGATCGGCTGTCTTGGACAGCGCTGTGGCCTATGGTGGGGCAAATCAAT
TCAACAGGCGATACATGTCC

Downstream 100 bases:

>100_bases
TCCGATCTGATGGAAGCGGTGCAAGCCGCAGGGAACAAACGCGCTGATCTCAACTTGACCGGGCGGCGCAGTATCGCTAA
CACGCAGGTGCGGCGGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Electron Transfer Protein; Vitamin; Corrinoid Activation/Regeneration Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Activating; Ferredoxin Domain-Containing Protein

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MRNDPLVVFTPSGKRGHFEVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFSKHGVTVREGALSEWNKVEQRYK
DKRGLIDGRRLGCQATVQGDVVIDVPPESQVHKQVVRKRAEARDIILDPSTKLYYVEVAEPDMHDPSGDLERLRDALRDQ
WELENVAADLHILQSMQPILRKGDWKVTVAVHLGDAENPPRIMNIWPGYYDGTVYGLAVDLGSTTIAAHLCDLQTGEVLA
SSGVMNPQIRFGEDLMSRVSYSMMNAGGADEMTEAVREGMRALFTQIAAEAQIDKALIVDAVFVCNPVMHHLFLGIDPFE
LGQAPFALTTNNALRLRADDLDLNIHPSARVYLLPCIAGHVGADAAAVALSEAPDKSDDLVLVVDVGTNAEILLGNKEKV
LACSSPTGPAFEGAQISSGQRAAPGAIERVEIDPVTKEPRFKVIGCDLWSDDPDFTKEVGPSGITGICGSGIIEMVAEMR
MNGIVDAPGLIGTPEQTGTQRCFLDGRTYSYLVYDATADGGPRITVTNRDIREIQMAKAALYSGARLLMDKFGVDKVDRV
VLAGAFGAHISSKHAMVLGMIPDAPLDKVTSAGNAAGTGARIALLNTAARAEIEATVSAIHKIETAIEPRFQEHFVNASA
IPNAVEPFPILNSIVSLPEATFNTGGGSESDARGGRRRRRRA

Sequences:

>Translated_682_residues
MRNDPLVVFTPSGKRGHFEVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFSKHGVTVREGALSEWNKVEQRYK
DKRGLIDGRRLGCQATVQGDVVIDVPPESQVHKQVVRKRAEARDIILDPSTKLYYVEVAEPDMHDPSGDLERLRDALRDQ
WELENVAADLHILQSMQPILRKGDWKVTVAVHLGDAENPPRIMNIWPGYYDGTVYGLAVDLGSTTIAAHLCDLQTGEVLA
SSGVMNPQIRFGEDLMSRVSYSMMNAGGADEMTEAVREGMRALFTQIAAEAQIDKALIVDAVFVCNPVMHHLFLGIDPFE
LGQAPFALTTNNALRLRADDLDLNIHPSARVYLLPCIAGHVGADAAAVALSEAPDKSDDLVLVVDVGTNAEILLGNKEKV
LACSSPTGPAFEGAQISSGQRAAPGAIERVEIDPVTKEPRFKVIGCDLWSDDPDFTKEVGPSGITGICGSGIIEMVAEMR
MNGIVDAPGLIGTPEQTGTQRCFLDGRTYSYLVYDATADGGPRITVTNRDIREIQMAKAALYSGARLLMDKFGVDKVDRV
VLAGAFGAHISSKHAMVLGMIPDAPLDKVTSAGNAAGTGARIALLNTAARAEIEATVSAIHKIETAIEPRFQEHFVNASA
IPNAVEPFPILNSIVSLPEATFNTGGGSESDARGGRRRRRRA
>Mature_682_residues
MRNDPLVVFTPSGKRGHFEVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFSKHGVTVREGALSEWNKVEQRYK
DKRGLIDGRRLGCQATVQGDVVIDVPPESQVHKQVVRKRAEARDIILDPSTKLYYVEVAEPDMHDPSGDLERLRDALRDQ
WELENVAADLHILQSMQPILRKGDWKVTVAVHLGDAENPPRIMNIWPGYYDGTVYGLAVDLGSTTIAAHLCDLQTGEVLA
SSGVMNPQIRFGEDLMSRVSYSMMNAGGADEMTEAVREGMRALFTQIAAEAQIDKALIVDAVFVCNPVMHHLFLGIDPFE
LGQAPFALTTNNALRLRADDLDLNIHPSARVYLLPCIAGHVGADAAAVALSEAPDKSDDLVLVVDVGTNAEILLGNKEKV
LACSSPTGPAFEGAQISSGQRAAPGAIERVEIDPVTKEPRFKVIGCDLWSDDPDFTKEVGPSGITGICGSGIIEMVAEMR
MNGIVDAPGLIGTPEQTGTQRCFLDGRTYSYLVYDATADGGPRITVTNRDIREIQMAKAALYSGARLLMDKFGVDKVDRV
VLAGAFGAHISSKHAMVLGMIPDAPLDKVTSAGNAAGTGARIALLNTAARAEIEATVSAIHKIETAIEPRFQEHFVNASA
IPNAVEPFPILNSIVSLPEATFNTGGGSESDARGGRRRRRRA

Specific function: Unknown

COG id: COG3894

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73364; Mature: 73364

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00455 AMP_BINDING ; PS51085 2FE2S_FER_2 ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDPLVVFTPSGKRGHFEVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFSKH
CCCCCEEEECCCCCCCCEECCCHHHHHHHHHCCCHHHHCCCCCCCCCCEECCCCCCHHHC
GVTVREGALSEWNKVEQRYKDKRGLIDGRRLGCQATVQGDVVIDVPPESQVHKQVVRKRA
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH
EARDIILDPSTKLYYVEVAEPDMHDPSGDLERLRDALRDQWELENVAADLHILQSMQPIL
HCCCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGDWKVTVAVHLGDAENPPRIMNIWPGYYDGTVYGLAVDLGSTTIAAHLCDLQTGEVLA
HCCCEEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEHHHHCCCCCCHHH
SSGVMNPQIRFGEDLMSRVSYSMMNAGGADEMTEAVREGMRALFTQIAAEAQIDKALIVD
HCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFVCNPVMHHLFLGIDPFELGQAPFALTTNNALRLRADDLDLNIHPSARVYLLPCIAGH
HHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCEEEEEECCCEEEECCCCEEEEEEEHHCC
VGADAAAVALSEAPDKSDDLVLVVDVGTNAEILLGNKEKVLACSSPTGPAFEGAQISSGQ
CCCCHHHEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
RAAPGAIERVEIDPVTKEPRFKVIGCDLWSDDPDFTKEVGPSGITGICGSGIIEMVAEMR
CCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
MNGIVDAPGLIGTPEQTGTQRCFLDGRTYSYLVYDATADGGPRITVTNRDIREIQMAKAA
HCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHH
LYSGARLLMDKFGVDKVDRVVLAGAFGAHISSKHAMVLGMIPDAPLDKVTSAGNAAGTGA
HHCCHHHHHHHCCCCHHHHEEEEEHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCC
RIALLNTAARAEIEATVSAIHKIETAIEPRFQEHFVNASAIPNAVEPFPILNSIVSLPEA
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCHHHHHHHHHCCCC
TFNTGGGSESDARGGRRRRRRA
CCCCCCCCCCHHCCCHHHHCCC
>Mature Secondary Structure
MRNDPLVVFTPSGKRGHFEVGTPILTAARQLGVDLDSVCGGRGICSKCQITPSYGEFSKH
CCCCCEEEECCCCCCCCEECCCHHHHHHHHHCCCHHHHCCCCCCCCCCEECCCCCCHHHC
GVTVREGALSEWNKVEQRYKDKRGLIDGRRLGCQATVQGDVVIDVPPESQVHKQVVRKRA
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH
EARDIILDPSTKLYYVEVAEPDMHDPSGDLERLRDALRDQWELENVAADLHILQSMQPIL
HCCCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKGDWKVTVAVHLGDAENPPRIMNIWPGYYDGTVYGLAVDLGSTTIAAHLCDLQTGEVLA
HCCCEEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEHHHHCCCCCCHHH
SSGVMNPQIRFGEDLMSRVSYSMMNAGGADEMTEAVREGMRALFTQIAAEAQIDKALIVD
HCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFVCNPVMHHLFLGIDPFELGQAPFALTTNNALRLRADDLDLNIHPSARVYLLPCIAGH
HHHHHHHHHHHHHCCCCHHHHCCCCEEEECCCEEEEEECCCEEEECCCCEEEEEEEHHCC
VGADAAAVALSEAPDKSDDLVLVVDVGTNAEILLGNKEKVLACSSPTGPAFEGAQISSGQ
CCCCHHHEEECCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC
RAAPGAIERVEIDPVTKEPRFKVIGCDLWSDDPDFTKEVGPSGITGICGSGIIEMVAEMR
CCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH
MNGIVDAPGLIGTPEQTGTQRCFLDGRTYSYLVYDATADGGPRITVTNRDIREIQMAKAA
HCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHH
LYSGARLLMDKFGVDKVDRVVLAGAFGAHISSKHAMVLGMIPDAPLDKVTSAGNAAGTGA
HHCCHHHHHHHCCCCHHHHEEEEEHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCC
RIALLNTAARAEIEATVSAIHKIETAIEPRFQEHFVNASAIPNAVEPFPILNSIVSLPEA
EEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCHHHHHHHHHCCCC
TFNTGGGSESDARGGRRRRRRA
CCCCCCCCCCHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA