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The map label for this gene is atoS [C]

Identifier: 110679929

GI number: 110679929

Start: 2581628

End: 2583958

Strand: Reverse

Name: atoS [C]

Synonym: RD1_2711

Alternate gene names: 110679929

Gene position: 2583958-2581628 (Counterclockwise)

Preceding gene: 110679930

Following gene: 110679928

Centisome position: 62.52

GC content: 60.02

Gene sequence:

>2331_bases
ATGACGGTGCGATTCGATACCAGGAGCGAGCGATTGTCCACGAGTGCCATACTGCCATCAAAACTGACTGAATTCGCGCT
TGGCGCCCAGAACAGATTTGCCGGCATATTGGTTGGCGCCGCCGTGCTTGCCATCGTCGGGCTGGCCGCCCCGCATGAGG
TTTTGCAGAAATCGCTGCTTGCCGCGGCCACCGCTCTGATCGTGCTGTGCGGCGTGTTGTATGGTTTGGTTGGCGCACAT
GGCAGACGCCAGAAGGCGACCCTTGCCACGCTGTCCAGCTTTATCGACAAGGATGCCGTTCCCGGGTTTCTGACGCGCGC
GGATGGTGAAATCCTGTCGCGCAACCAGGCGGCCCGCAGCCGTTTTCAGGGGCAGGCCGGTGATACGCTGATCGGCGCAC
TCGACAGGACGGTTGCCGATCCGGCCGCCATCCTCTCTCGCCTTCAGACGCGGGCCGATACCGAAGGGTTCGCGCAGGAG
GAGCTTGTCACGCGCAAGGGCCACATCCGCGTTGGCGTCAATAAAGCGGGCGCGAATGCCTATGCCTGGCGCTTTGAAGA
TGTCGCGGTTGCGGCTGCTCAAAACGACGGGCCTGCTTTGCCGATGATCCTTGTGGGCCGCACAAATGCGATCCTCTACA
TGAATGATCCTGCGCGGGATCTGGTGGGCGGACGGGTCACATCGCTCGAACGTCTGTTCAAGACGATGCCTGTGCAATCG
GGCACCGTCTGCGACATCGAAGGGGTGGAGGGCCCGGCGCGGGTGCTTGTGAGCGAAGTATCCGCCGGGGCAGGGCGCAA
GGCGCTTTATCTGTTGCCGCCCGGTCCAGCCTCTGTGCGGGATGATGAATGGAACGTCTTTGAAAACCTGCCGGTTCCGC
TGCTCAAGGTGGGGGCGGATGGTCAGGTTCAGGCCTTCAACCTCATGGCGTCCAACCTGATCGGCATCGCGCTCGAACGC
GATGTGCATTTGTCCGACCTCATGGAGGGGCTTGGCCGGTCCATCACGGACTGGCTGACCGATACGCTTGCCGGGCGTGC
ATCGCAGCCGACGGAGTTTCTGCGCCTGAAACGCACCGACAAGGAGGTGTTTGTTCAGGTGACCCTCAACAGGATTTCAG
AAAGCGGCGATCCGACGCTGATTGCGGTGCTCAGCGACGCCACCGAGTTGAAATCGCTGGAGGCACAATTCGTACAGAGC
CAGAAGATGCAGGCGATCGGGCAGTTGGCCGGCGGTGTTGCGCATGATTTCAACAACCTGCTCACAGCGATTTCGGGTCA
TTGCGACCTCTTGTTGCTGCGCCATGACCAGGGCGACCCCGATTTCAGCGATCTGGTTCAGATCAATCAGAACGCAAACC
GGGCCGCGGCGCTGGTCGGCCAGCTTTTGGCCTTTTCGCGCAAACAGACCCTGCGCCCCGAAACGCTGGACATGCGCGAC
ACGCTCGCGGATCTGACGCATCTGCTGAACCGGCTGGTGGGCGAGAAGGTCACGCTGACCCTGACCCATGATCCGGTTTT
ACTGCCCATCCGCGCCGATAAACGCCAGCTTGAACAGGTTCTGATGAACCTCGTGGTGAATGCGCGCGATGCGATGCCCA
ACGGGGGCGAAATCCGTATCGAAACGCAATGCATCCGACTGAAAGCGCCGCTCAACCGCGACCGTGTCACGGTGCCTGTG
GGCGAATATGTCACTGTGCATGTGTCAGATGACGGCATCGGTATCCCCTCCGACAAGCTGCAAAAGGTCTTCGAGCCCTT
TTACACGACGAAACGCACCGGCGAGGGAACGGGTCTGGGCCTGTCAACGGCCTATGGAATCGTGAAACAGACCGGCGCCT
ATATCTTCGTAGACAGCACCGTTGGCGTTGGCACGCGCTTTACCCTCTATTTTCCTGTACTTGAAAACAGAAAACCTGCG
CCGGTTGCACCGCGCGTTGAAACAAAGAAACCAACCGGCAAACATGGCGATGGCGTGATCCTTCTGGTGGAGGACGAGGC
CCCCGTCAGGGCCTTTGCCAGCCGTGCGTTGCGCCTGCGGGGCTACACGGTGCTGGAGGCCGATTCTGCCGAAGCGGCGC
TCAAGACCCTTGAGGATGAGACGCTGAACGTGGATGTTTTCGTGACGGATGTGGTCATGCCCGGAATGGACGGCCCGAGT
TGGGTGCGCGAGGCGCTGAAGAACAGACCGGATGTGCGCGTCGTCTTTGTCTCGGGCTATGCTGAGGACAGTTTTGGCGA
GGCGCAGATGAAAATCCCAAACTCGGTATTTCTGCCAAAACCGTTTTCTCTCAATGACTTGACGGACACAGTTCACGAGC
AGCTGCATTGA

Upstream 100 bases:

>100_bases
TTACACGGCACACTTGACGCGGGGATAATTGCTGCAATACTCAACCTTAACGAGCACACCTGATCGTGGTTAAGTCGGGA
TTAACTCCTAGGGCGCTTTG

Downstream 100 bases:

>100_bases
CATCGCACCTTGCCTCGCCGCCAGCGTGACGCGATGACCGGGTGGCTGGCGAGATAAAATGCATCGCCGCATTTTTTTTC
AATCACTCTTTAACCAGTTC

Product: sensor kinase-like protein, putative

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 776; Mature: 775

Protein sequence:

>776_residues
MTVRFDTRSERLSTSAILPSKLTEFALGAQNRFAGILVGAAVLAIVGLAAPHEVLQKSLLAAATALIVLCGVLYGLVGAH
GRRQKATLATLSSFIDKDAVPGFLTRADGEILSRNQAARSRFQGQAGDTLIGALDRTVADPAAILSRLQTRADTEGFAQE
ELVTRKGHIRVGVNKAGANAYAWRFEDVAVAAAQNDGPALPMILVGRTNAILYMNDPARDLVGGRVTSLERLFKTMPVQS
GTVCDIEGVEGPARVLVSEVSAGAGRKALYLLPPGPASVRDDEWNVFENLPVPLLKVGADGQVQAFNLMASNLIGIALER
DVHLSDLMEGLGRSITDWLTDTLAGRASQPTEFLRLKRTDKEVFVQVTLNRISESGDPTLIAVLSDATELKSLEAQFVQS
QKMQAIGQLAGGVAHDFNNLLTAISGHCDLLLLRHDQGDPDFSDLVQINQNANRAAALVGQLLAFSRKQTLRPETLDMRD
TLADLTHLLNRLVGEKVTLTLTHDPVLLPIRADKRQLEQVLMNLVVNARDAMPNGGEIRIETQCIRLKAPLNRDRVTVPV
GEYVTVHVSDDGIGIPSDKLQKVFEPFYTTKRTGEGTGLGLSTAYGIVKQTGAYIFVDSTVGVGTRFTLYFPVLENRKPA
PVAPRVETKKPTGKHGDGVILLVEDEAPVRAFASRALRLRGYTVLEADSAEAALKTLEDETLNVDVFVTDVVMPGMDGPS
WVREALKNRPDVRVVFVSGYAEDSFGEAQMKIPNSVFLPKPFSLNDLTDTVHEQLH

Sequences:

>Translated_776_residues
MTVRFDTRSERLSTSAILPSKLTEFALGAQNRFAGILVGAAVLAIVGLAAPHEVLQKSLLAAATALIVLCGVLYGLVGAH
GRRQKATLATLSSFIDKDAVPGFLTRADGEILSRNQAARSRFQGQAGDTLIGALDRTVADPAAILSRLQTRADTEGFAQE
ELVTRKGHIRVGVNKAGANAYAWRFEDVAVAAAQNDGPALPMILVGRTNAILYMNDPARDLVGGRVTSLERLFKTMPVQS
GTVCDIEGVEGPARVLVSEVSAGAGRKALYLLPPGPASVRDDEWNVFENLPVPLLKVGADGQVQAFNLMASNLIGIALER
DVHLSDLMEGLGRSITDWLTDTLAGRASQPTEFLRLKRTDKEVFVQVTLNRISESGDPTLIAVLSDATELKSLEAQFVQS
QKMQAIGQLAGGVAHDFNNLLTAISGHCDLLLLRHDQGDPDFSDLVQINQNANRAAALVGQLLAFSRKQTLRPETLDMRD
TLADLTHLLNRLVGEKVTLTLTHDPVLLPIRADKRQLEQVLMNLVVNARDAMPNGGEIRIETQCIRLKAPLNRDRVTVPV
GEYVTVHVSDDGIGIPSDKLQKVFEPFYTTKRTGEGTGLGLSTAYGIVKQTGAYIFVDSTVGVGTRFTLYFPVLENRKPA
PVAPRVETKKPTGKHGDGVILLVEDEAPVRAFASRALRLRGYTVLEADSAEAALKTLEDETLNVDVFVTDVVMPGMDGPS
WVREALKNRPDVRVVFVSGYAEDSFGEAQMKIPNSVFLPKPFSLNDLTDTVHEQLH
>Mature_775_residues
TVRFDTRSERLSTSAILPSKLTEFALGAQNRFAGILVGAAVLAIVGLAAPHEVLQKSLLAAATALIVLCGVLYGLVGAHG
RRQKATLATLSSFIDKDAVPGFLTRADGEILSRNQAARSRFQGQAGDTLIGALDRTVADPAAILSRLQTRADTEGFAQEE
LVTRKGHIRVGVNKAGANAYAWRFEDVAVAAAQNDGPALPMILVGRTNAILYMNDPARDLVGGRVTSLERLFKTMPVQSG
TVCDIEGVEGPARVLVSEVSAGAGRKALYLLPPGPASVRDDEWNVFENLPVPLLKVGADGQVQAFNLMASNLIGIALERD
VHLSDLMEGLGRSITDWLTDTLAGRASQPTEFLRLKRTDKEVFVQVTLNRISESGDPTLIAVLSDATELKSLEAQFVQSQ
KMQAIGQLAGGVAHDFNNLLTAISGHCDLLLLRHDQGDPDFSDLVQINQNANRAAALVGQLLAFSRKQTLRPETLDMRDT
LADLTHLLNRLVGEKVTLTLTHDPVLLPIRADKRQLEQVLMNLVVNARDAMPNGGEIRIETQCIRLKAPLNRDRVTVPVG
EYVTVHVSDDGIGIPSDKLQKVFEPFYTTKRTGEGTGLGLSTAYGIVKQTGAYIFVDSTVGVGTRFTLYFPVLENRKPAP
VAPRVETKKPTGKHGDGVILLVEDEAPVRAFASRALRLRGYTVLEADSAEAALKTLEDETLNVDVFVTDVVMPGMDGPSW
VREALKNRPDVRVVFVSGYAEDSFGEAQMKIPNSVFLPKPFSLNDLTDTVHEQLH

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=279, Percent_Identity=29.7491039426523, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI145693157, Length=391, Percent_Identity=23.2736572890026, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1788713, Length=426, Percent_Identity=24.4131455399061, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI87081816, Length=276, Percent_Identity=26.4492753623188, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1790300, Length=245, Percent_Identity=30.2040816326531, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI48994928, Length=278, Percent_Identity=29.136690647482, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786600, Length=271, Percent_Identity=25.4612546125461, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1790861, Length=227, Percent_Identity=31.2775330396476, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1786912, Length=312, Percent_Identity=25.9615384615385, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 83941; Mature: 83810

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRFDTRSERLSTSAILPSKLTEFALGAQNRFAGILVGAAVLAIVGLAAPHEVLQKSLL
CEEEECCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAATALIVLCGVLYGLVGAHGRRQKATLATLSSFIDKDAVPGFLTRADGEILSRNQAARS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCHHHHH
RFQGQAGDTLIGALDRTVADPAAILSRLQTRADTEGFAQEELVTRKGHIRVGVNKAGANA
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCE
YAWRFEDVAVAAAQNDGPALPMILVGRTNAILYMNDPARDLVGGRVTSLERLFKTMPVQS
EEEEECCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHCCCCC
GTVCDIEGVEGPARVLVSEVSAGAGRKALYLLPPGPASVRDDEWNVFENLPVPLLKVGAD
CCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCC
GQVQAFNLMASNLIGIALERDVHLSDLMEGLGRSITDWLTDTLAGRASQPTEFLRLKRTD
CCEEHHHHHHHHHHEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCC
KEVFVQVTLNRISESGDPTLIAVLSDATELKSLEAQFVQSQKMQAIGQLAGGVAHDFNNL
CEEEEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LTAISGHCDLLLLRHDQGDPDFSDLVQINQNANRAAALVGQLLAFSRKQTLRPETLDMRD
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TLADLTHLLNRLVGEKVTLTLTHDPVLLPIRADKRQLEQVLMNLVVNARDAMPNGGEIRI
HHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
ETQCIRLKAPLNRDRVTVPVGEYVTVHVSDDGIGIPSDKLQKVFEPFYTTKRTGEGTGLG
EEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
LSTAYGIVKQTGAYIFVDSTVGVGTRFTLYFPVLENRKPAPVAPRVETKKPTGKHGDGVI
HHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
LLVEDEAPVRAFASRALRLRGYTVLEADSAEAALKTLEDETLNVDVFVTDVVMPGMDGPS
EEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHH
WVREALKNRPDVRVVFVSGYAEDSFGEAQMKIPNSVFLPKPFSLNDLTDTVHEQLH
HHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TVRFDTRSERLSTSAILPSKLTEFALGAQNRFAGILVGAAVLAIVGLAAPHEVLQKSLL
EEEECCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAATALIVLCGVLYGLVGAHGRRQKATLATLSSFIDKDAVPGFLTRADGEILSRNQAARS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCHHHHH
RFQGQAGDTLIGALDRTVADPAAILSRLQTRADTEGFAQEELVTRKGHIRVGVNKAGANA
HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCE
YAWRFEDVAVAAAQNDGPALPMILVGRTNAILYMNDPARDLVGGRVTSLERLFKTMPVQS
EEEEECCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHCCHHHHHHHHHHHCCCCC
GTVCDIEGVEGPARVLVSEVSAGAGRKALYLLPPGPASVRDDEWNVFENLPVPLLKVGAD
CCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCC
GQVQAFNLMASNLIGIALERDVHLSDLMEGLGRSITDWLTDTLAGRASQPTEFLRLKRTD
CCEEHHHHHHHHHHEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHCCC
KEVFVQVTLNRISESGDPTLIAVLSDATELKSLEAQFVQSQKMQAIGQLAGGVAHDFNNL
CEEEEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
LTAISGHCDLLLLRHDQGDPDFSDLVQINQNANRAAALVGQLLAFSRKQTLRPETLDMRD
HHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TLADLTHLLNRLVGEKVTLTLTHDPVLLPIRADKRQLEQVLMNLVVNARDAMPNGGEIRI
HHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEE
ETQCIRLKAPLNRDRVTVPVGEYVTVHVSDDGIGIPSDKLQKVFEPFYTTKRTGEGTGLG
EEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
LSTAYGIVKQTGAYIFVDSTVGVGTRFTLYFPVLENRKPAPVAPRVETKKPTGKHGDGVI
HHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
LLVEDEAPVRAFASRALRLRGYTVLEADSAEAALKTLEDETLNVDVFVTDVVMPGMDGPS
EEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCHH
WVREALKNRPDVRVVFVSGYAEDSFGEAQMKIPNSVFLPKPFSLNDLTDTVHEQLH
HHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCEECCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA