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The map label for this gene is recA [H]

Identifier: 110679928

GI number: 110679928

Start: 2580309

End: 2581388

Strand: Reverse

Name: recA [H]

Synonym: RD1_2710

Alternate gene names: 110679928

Gene position: 2581388-2580309 (Counterclockwise)

Preceding gene: 110679929

Following gene: 110679927

Centisome position: 62.46

GC content: 56.57

Gene sequence:

>1080_bases
ATGGCAACGGCAGATCTACTCAGCATGAACAGCAAGAAATCCGCAGATAAACAGAAAGCGCTCGACTCCGCATTGGCCCA
GATCGAACGCCAGTTCGGCAAGGGCTCGATCATGAAACTGGGGGCCGAAGGTGCCGTTCAGGACATTCAGGCAAGCTCAA
CCGGCTCCCTGGGGCTTGATATCGCCTTGGGCATAGGTGGTCTGCCGATGGGCAGAATCGTCGAAATCTACGGCCCTGAA
AGTTCGGGCAAGACCACGCTGACCCTGCATTGCGTTGCCGAGCAGCAAAAAGCGGGCGGTGTCTGCGCATTTGTTGATGC
GGAACACGCGCTTGATCCGACATATGCAAAAAAGCTGGGTGTTGATCTGGACGAATTGCTGATCAGTCAGCCCGATACCG
GCGAGCAAGCGCTTGAAATTACCGATACGCTCGTGCGCTCGGGTGCAGTGAACATGGTGATCGTGGATTCTGTGGCCGCG
CTGACGCCAAAGTCCGAGCTGGAAGGCGATATGGGCGACAGTTCCGTCGGCGTTCAGGCCCGCCTGATGAGCCAGGCGAT
GCGCAAGCTGACAGGCTCCATCAGCCGCAGCAACTGTATGGTGATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCA
TGTTCGGATCGCCCGAGACAACGACGGGCGGTAATGCGCTCAAGTTCTATTCATCCGTTCGCCTTGATATCCGGCGTATC
GGCGCACTGAAGGACCGCGATGAGGTCGTCGGGAACCACACCCGCGTCAAGGTCGTCAAGAACAAGGTTGCAGCACCTTT
CAAGCAAGTCGAATTTGATATCATGTACGGCGAAGGTATCTCCAAAATGGGGGAGCTTCTGGACCTTGGCGTGGCTGCCG
GTGTGGTGGATAAATCCGGGTCATGGTTCAGCTATGGGGATGAACGGATCGGGCAGGGGCGTGAGAACGCCAAGGGATTC
CTGCGCGAAAACGTCCAGATGGCGCTTGAGATCGAGGATAAGATTCGCGCCGCACATGGGCTGGATTTCGACATGCCGGC
GCATGAGAAGAAAGCGGACGACGATATTCTTGAGGCCTAA

Upstream 100 bases:

>100_bases
CTCATTTTGGTCCCATAAGGAACGTAATGAGAACAAACGCACAGAGCGCGTCGGCAACGATTGCTGCAGCGGGTAAACTG
TGACAGTAAGAGGAAATGAA

Downstream 100 bases:

>100_bases
AGCACCACCAAGCAAGACACCCGCATTTCAAGGGCGCACCAACCGGCTGCGCCCTTTTCCATTTATGCGCAAGCTGCTTG
TGGACAGCCACGACGGACGG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MATADLLSMNSKKSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLDIALGIGGLPMGRIVEIYGPE
SSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLGVDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAA
LTPKSELEGDMGDSSVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GALKDRDEVVGNHTRVKVVKNKVAAPFKQVEFDIMYGEGISKMGELLDLGVAAGVVDKSGSWFSYGDERIGQGRENAKGF
LRENVQMALEIEDKIRAAHGLDFDMPAHEKKADDDILEA

Sequences:

>Translated_359_residues
MATADLLSMNSKKSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLDIALGIGGLPMGRIVEIYGPE
SSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLGVDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAA
LTPKSELEGDMGDSSVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
GALKDRDEVVGNHTRVKVVKNKVAAPFKQVEFDIMYGEGISKMGELLDLGVAAGVVDKSGSWFSYGDERIGQGRENAKGF
LRENVQMALEIEDKIRAAHGLDFDMPAHEKKADDDILEA
>Mature_358_residues
ATADLLSMNSKKSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLDIALGIGGLPMGRIVEIYGPES
SGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLGVDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAAL
TPKSELEGDMGDSSVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIG
ALKDRDEVVGNHTRVKVVKNKVAAPFKQVEFDIMYGEGISKMGELLDLGVAAGVVDKSGSWFSYGDERIGQGRENAKGFL
RENVQMALEIEDKIRAAHGLDFDMPAHEKKADDDILEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=321, Percent_Identity=69.4704049844237, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38385; Mature: 38254

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATADLLSMNSKKSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLD
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCEE
IALGIGGLPMGRIVEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECHHCCCCEEEEECCHHCCCHHHHHHHC
VDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQA
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHCCCCCCCCCCCHHH
RLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHH
GALKDRDEVVGNHTRVKVVKNKVAAPFKQVEFDIMYGEGISKMGELLDLGVAAGVVDKSG
CCCCCHHHHHCCCEEEEEEHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
SWFSYGDERIGQGRENAKGFLRENVQMALEIEDKIRAAHGLDFDMPAHEKKADDDILEA
CCCCCCHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
ATADLLSMNSKKSADKQKALDSALAQIERQFGKGSIMKLGAEGAVQDIQASSTGSLGLD
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCEE
IALGIGGLPMGRIVEIYGPESSGKTTLTLHCVAEQQKAGGVCAFVDAEHALDPTYAKKLG
EEECCCCCCCCCEEEEECCCCCCCEEEEEEEEECHHCCCCEEEEECCHHCCCHHHHHHHC
VDLDELLISQPDTGEQALEITDTLVRSGAVNMVIVDSVAALTPKSELEGDMGDSSVGVQA
CCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHCCCCCCCCCCCHHH
RLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRI
HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHH
GALKDRDEVVGNHTRVKVVKNKVAAPFKQVEFDIMYGEGISKMGELLDLGVAAGVVDKSG
CCCCCHHHHHCCCEEEEEEHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
SWFSYGDERIGQGRENAKGFLRENVQMALEIEDKIRAAHGLDFDMPAHEKKADDDILEA
CCCCCCHHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA