| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679926
Identifier: 110679926
GI number: 110679926
Start: 2577213
End: 2577500
Strand: Reverse
Name: 110679926
Synonym: RD1_2708
Alternate gene names: NA
Gene position: 2577500-2577213 (Counterclockwise)
Preceding gene: 110679927
Following gene: 110679923
Centisome position: 62.36
GC content: 55.9
Gene sequence:
>288_bases ATGGGCGCGCTTTGGATTGCACATGTCAAGGTCACGGATGAGGAAGCCTATGGAAAATACGCAGCCCTCGCCACAGAGGC GATTGCCGCGCATGGCGGCCATTTCATCGCCCGCGGTGGTCGCTTCGTCCAACTGGAAGGTCAAGCCCGCCCGCGCAATG TCGTGGCACGGTTTCCCGATGTTGAATCCGCTGAAAAATGTTATAATTCAGAAATTTACCAGCGGGCCTTAAACCATGCG CGCGATGCGTCCGAGCGGGATCTGATGATCATCGAGACAACCGAATAG
Upstream 100 bases:
>100_bases GGCGGTGGACGTCCCGACATGGCGCAGGGCGGTGCAAAAGATGCCGCCAATGCCGATGCCGCGATTGCAGCCGCAGAAAC AGTCTTGAAAGGATAGGGTG
Downstream 100 bases:
>100_bases CGCCCTTTGCGCCCGGCACGGCACCGGGCGCAGAAAAGTCATTCAGCCTGCGCGCGCCATGCGTTTGCGCTCATGCGGAT CAAGGTAGCGTTTGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MGALWIAHVKVTDEEAYGKYAALATEAIAAHGGHFIARGGRFVQLEGQARPRNVVARFPDVESAEKCYNSEIYQRALNHA RDASERDLMIIETTE
Sequences:
>Translated_95_residues MGALWIAHVKVTDEEAYGKYAALATEAIAAHGGHFIARGGRFVQLEGQARPRNVVARFPDVESAEKCYNSEIYQRALNHA RDASERDLMIIETTE >Mature_94_residues GALWIAHVKVTDEEAYGKYAALATEAIAAHGGHFIARGGRFVQLEGQARPRNVVARFPDVESAEKCYNSEIYQRALNHAR DASERDLMIIETTE
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10561; Mature: 10430
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALWIAHVKVTDEEAYGKYAALATEAIAAHGGHFIARGGRFVQLEGQARPRNVVARFPD CCCEEEEEEEEECCHHCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEECCC VESAEKCYNSEIYQRALNHARDASERDLMIIETTE CCHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure GALWIAHVKVTDEEAYGKYAALATEAIAAHGGHFIARGGRFVQLEGQARPRNVVARFPD CCEEEEEEEEECCHHCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEECCC VESAEKCYNSEIYQRALNHARDASERDLMIIETTE CCHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA