| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is bcp [H]
Identifier: 110679899
GI number: 110679899
Start: 2550708
End: 2551190
Strand: Direct
Name: bcp [H]
Synonym: RD1_2676
Alternate gene names: 110679899
Gene position: 2550708-2551190 (Clockwise)
Preceding gene: 110679898
Following gene: 110679901
Centisome position: 61.71
GC content: 59.63
Gene sequence:
>483_bases ATGCTTACGCGCCGTGAATTCACACTCTCCCTTGCGGCGCTGGCAGGAACGCAAGCCATTGCCAGGCCCCTCACACCGGC AGAGAAAAACGCGCGGCATTCGGTGCTCATGCTTAATGCCGCCTGCGGGGATGCGCAAAGGCTCAACCTGTTTGAGCCTG CAATTCTGAGGGTGAATGCGGGCGATACCGTCACTTTTCTTGCCACGGACAGCGGGCATAATACCGCCTCGAAACGGGGT ATGATCCCGCAAGGGGCCACGCCCTGGAACGGCGGGATCGACGAAGAGATCAGCGTGACCCTGTCTATACCCGGCATTTA CGGATACATCTGCCTGCCACATTACGAAATGGGCATGGTGGGTCTGATCATCGCCGGGGACAATCTGACGAACCTCGCCG CTGCCAGCAAACTGCGCCATCCCGGTCAGGCGCATGCGGCCTTCCGCGCATTGTTGAAAACGCTGGAGCCGCACAAGGCA TAG
Upstream 100 bases:
>100_bases GAGGGCCCGCCGCGTTTTGTACTGAACAGCCCCGAGATCGGCCAGACCTATGGCGTTGATATCCACATCACCACCGGCCC AAAGGAGGATCTGGTTGTCC
Downstream 100 bases:
>100_bases TCGCGCGCAGATGATACCTCAATGCGCCGTGATGCGGAGGGTGCAACGGTGGCAGCGGCAAAGATGCCTTGGTCGTTGGA CAGGCCGCATAAACCAACTG
Product: pseudoazurin
Products: NA
Alternate protein names: Blue copper protein [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLTRREFTLSLAALAGTQAIARPLTPAEKNARHSVLMLNAACGDAQRLNLFEPAILRVNAGDTVTFLATDSGHNTASKRG MIPQGATPWNGGIDEEISVTLSIPGIYGYICLPHYEMGMVGLIIAGDNLTNLAAASKLRHPGQAHAAFRALLKTLEPHKA
Sequences:
>Translated_160_residues MLTRREFTLSLAALAGTQAIARPLTPAEKNARHSVLMLNAACGDAQRLNLFEPAILRVNAGDTVTFLATDSGHNTASKRG MIPQGATPWNGGIDEEISVTLSIPGIYGYICLPHYEMGMVGLIIAGDNLTNLAAASKLRHPGQAHAAFRALLKTLEPHKA >Mature_160_residues MLTRREFTLSLAALAGTQAIARPLTPAEKNARHSVLMLNAACGDAQRLNLFEPAILRVNAGDTVTFLATDSGHNTASKRG MIPQGATPWNGGIDEEISVTLSIPGIYGYICLPHYEMGMVGLIIAGDNLTNLAAASKLRHPGQAHAAFRALLKTLEPHKA
Specific function: This soluble electron transfer copper protein is required for the inactivation of copper-containing nitrite reductase in the presence of oxygen [H]
COG id: COG3794
COG function: function code C; Plastocyanin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 plastocyanin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002386 - InterPro: IPR000923 - InterPro: IPR001235 - InterPro: IPR008972 - InterPro: IPR012745 [H]
Pfam domain/function: PF00127 Copper-bind [H]
EC number: NA
Molecular weight: Translated: 17011; Mature: 17011
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRREFTLSLAALAGTQAIARPLTPAEKNARHSVLMLNAACGDAQRLNLFEPAILRVNA CCCCCHHHEEHHHHHCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECC GDTVTFLATDSGHNTASKRGMIPQGATPWNGGIDEEISVTLSIPGIYGYICLPHYEMGMV CCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEE GLIIAGDNLTNLAAASKLRHPGQAHAAFRALLKTLEPHKA EEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLTRREFTLSLAALAGTQAIARPLTPAEKNARHSVLMLNAACGDAQRLNLFEPAILRVNA CCCCCHHHEEHHHHHCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECC GDTVTFLATDSGHNTASKRGMIPQGATPWNGGIDEEISVTLSIPGIYGYICLPHYEMGMV CCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEE GLIIAGDNLTNLAAASKLRHPGQAHAAFRALLKTLEPHKA EEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8605003; 3595868; 8138527 [H]