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The map label for this gene is 110679894

Identifier: 110679894

GI number: 110679894

Start: 2545670

End: 2546662

Strand: Reverse

Name: 110679894

Synonym: RD1_2671

Alternate gene names: NA

Gene position: 2546662-2545670 (Counterclockwise)

Preceding gene: 110679900

Following gene: 110679893

Centisome position: 61.62

GC content: 60.62

Gene sequence:

>993_bases
ATGTCCAGCCCGTTCATCATTGTGGTCGCCTTGTTTTCATGGGCCACACTGCTCGTTGTCAGCCGGGTGGTCCTGTTGCG
GTTCGGTCTGGACCCGTGGCTGTTCACATTCATCCAAATGATGGCGGGTGGTGCGTTTTTGCTGGCCGTTTCGGGCCGCT
CCATCCGGGCTTGGGGCCTTTTGCGCGATCCGGTCATCTGGGTCTACGGGGTGTTACGGGTGGCGACGGCCGCGTTTTTC
ACCGCTTCATTGATCTATACGACAGCGGCAAATGCTGCGTTTCTCAGCATCCTGTCAGTTCCCACCAGTGTCGTTCTGCT
GTGGTTCATCGCCGCGCGTCGTCCGCAGGCCGGGGAGTTTCCGGGCCACTTTCTGGTCCTGCTGGGTATGGTCTTGTTGA
CCAGCCAGCTTGACGGTGCCTGGCGCAATCCCGCGGTACTTTTGATGATCGCCTCGGAACTCTGTGTCGTACTTTCAACG
TTCATCGCGGAAAAACACCCCGTCAACCAAACCCGAAACCCCCGCGCGCGCGCCGGATTGACGGGTGTCATGCTCTTGGT
CAGCTCTTTTGTCATGCTGCTCTGCGCGCTTACGGCAGGGGCGGCGCTGAGCCAAATACCCCTGCTTGGGACCACGATGC
TGTCGGGGCCGATCTGGCTGACGGATCCGCTGGTTGTTCTGAACCCTGTTTTGTGGGTGTCTGCGATCCTCGTGGGGGTG
GCGTTGCGCGGGCCTTCGATGTTCGTTGCCTTGGCCGCCATTCATCGGGTGCGTACCGAGAATTATCTCGCCGGGATGGC
AGCCCTGCCACTGGTGTCCTTGGCGCTGGAAAAAGCGGCCACAGGTCTGGGGCTGCTTGACCCGGTGCCCTTGGATGGGC
CGACAACCCTGTGCGGTGTTGTCATGGTCACAGGGTCACTGCTGGTGATCTGGTCGCGCCATAAACGCAACGGACGTGAG
CGCGCAACAGGTGCCCCGAACACCACCGAATAG

Upstream 100 bases:

>100_bases
TTCGATCAGGGAATGATCGTCATATCACGCGCGGCACCCCCCCAGCCTGCATTGACGAAAAGGGCACATTCTGCCCAATT
GACCGGAAAAACCCTCGCGC

Downstream 100 bases:

>100_bases
GCTGGTGTTGCGGGTCGGTTTCATTCCGTTGCAGAAATCTCTTGAATTACCCAAATATTTTTGTCAGGAATTATGAAAGC
AACCAGAACACAGGCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSSPFIIVVALFSWATLLVVSRVVLLRFGLDPWLFTFIQMMAGGAFLLAVSGRSIRAWGLLRDPVIWVYGVLRVATAAFF
TASLIYTTAANAAFLSILSVPTSVVLLWFIAARRPQAGEFPGHFLVLLGMVLLTSQLDGAWRNPAVLLMIASELCVVLST
FIAEKHPVNQTRNPRARAGLTGVMLLVSSFVMLLCALTAGAALSQIPLLGTTMLSGPIWLTDPLVVLNPVLWVSAILVGV
ALRGPSMFVALAAIHRVRTENYLAGMAALPLVSLALEKAATGLGLLDPVPLDGPTTLCGVVMVTGSLLVIWSRHKRNGRE
RATGAPNTTE

Sequences:

>Translated_330_residues
MSSPFIIVVALFSWATLLVVSRVVLLRFGLDPWLFTFIQMMAGGAFLLAVSGRSIRAWGLLRDPVIWVYGVLRVATAAFF
TASLIYTTAANAAFLSILSVPTSVVLLWFIAARRPQAGEFPGHFLVLLGMVLLTSQLDGAWRNPAVLLMIASELCVVLST
FIAEKHPVNQTRNPRARAGLTGVMLLVSSFVMLLCALTAGAALSQIPLLGTTMLSGPIWLTDPLVVLNPVLWVSAILVGV
ALRGPSMFVALAAIHRVRTENYLAGMAALPLVSLALEKAATGLGLLDPVPLDGPTTLCGVVMVTGSLLVIWSRHKRNGRE
RATGAPNTTE
>Mature_329_residues
SSPFIIVVALFSWATLLVVSRVVLLRFGLDPWLFTFIQMMAGGAFLLAVSGRSIRAWGLLRDPVIWVYGVLRVATAAFFT
ASLIYTTAANAAFLSILSVPTSVVLLWFIAARRPQAGEFPGHFLVLLGMVLLTSQLDGAWRNPAVLLMIASELCVVLSTF
IAEKHPVNQTRNPRARAGLTGVMLLVSSFVMLLCALTAGAALSQIPLLGTTMLSGPIWLTDPLVVLNPVLWVSAILVGVA
LRGPSMFVALAAIHRVRTENYLAGMAALPLVSLALEKAATGLGLLDPVPLDGPTTLCGVVMVTGSLLVIWSRHKRNGRER
ATGAPNTTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35251; Mature: 35119

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPFIIVVALFSWATLLVVSRVVLLRFGLDPWLFTFIQMMAGGAFLLAVSGRSIRAWGL
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEECCC
LRDPVIWVYGVLRVATAAFFTASLIYTTAANAAFLSILSVPTSVVLLWFIAARRPQAGEF
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGHFLVLLGMVLLTSQLDGAWRNPAVLLMIASELCVVLSTFIAEKHPVNQTRNPRARAGL
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
TGVMLLVSSFVMLLCALTAGAALSQIPLLGTTMLSGPIWLTDPLVVLNPVLWVSAILVGV
HHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH
ALRGPSMFVALAAIHRVRTENYLAGMAALPLVSLALEKAATGLGLLDPVPLDGPTTLCGV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
VMVTGSLLVIWSRHKRNGRERATGAPNTTE
HHHHCCCEEEEECCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SSPFIIVVALFSWATLLVVSRVVLLRFGLDPWLFTFIQMMAGGAFLLAVSGRSIRAWGL
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEECCC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HHHHCCCEEEEECCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA