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The map label for this gene is 110679852

Identifier: 110679852

GI number: 110679852

Start: 2504518

End: 2505195

Strand: Reverse

Name: 110679852

Synonym: RD1_2624

Alternate gene names: NA

Gene position: 2505195-2504518 (Counterclockwise)

Preceding gene: 110679854

Following gene: 110679847

Centisome position: 60.61

GC content: 57.82

Gene sequence:

>678_bases
ATGAAGGCAGGTCGCCTGACAGGCTTTTGCGATCATGCTAGAGCATTGGCAAACATCCAAGACGGAGCCACCATGTCCAG
AACTTCCAGATCGCCTTTTGCACGCGCTCTTTTGATAGCCGCTTTTTTGACGGCGCCCATGACCCTTTTTGCGCAGGACG
CAAAGGAAGGTGGCCTCACCGGCGAAGGGCTCGCATTGGGCACTGAAATCGATGATACACCCCGTCCGGGCGACACCTAC
ATTAAAGAGACCTTTCAGGATTGGTCGCTGCGCTGCGTGGTCGTGGCGGACGCGGATGATCTGTGCCAGATGTACCAGCT
TCTGTCCGATTCCAACGGCTCTCCTGTTGCGGAATTTACGGCGTTCCGCCTGCCGGAAGGCGGTCAGGCCGCAGCGGGCG
CAACCATCGTTGTCCCCCTTGAAACTGCGCTGGTGGAACAGCTGGCAATCAAGGTCGATGACGCAGCCGGTCGCAAATAC
CCATACGCCTATTGCAACACCATTGGCTGTTACGCGCGGATCGGTCTCACCCAGGCAGATGTCGAGGCCTATAAACGCGG
CGCTGAGGCTGTGTTATCCATCGTTCCCATCGCGGCCCCCGATCAGCGTGTCAATGTGACCTTGTCACTGAAAGGGTTTA
CCGCCGCGTTCGAGGCATCCTCCTACCTCACGCAATAG

Upstream 100 bases:

>100_bases
GGCCAGTCCGACGGGGAGAAAAAAATACGGAAAAGGGAATGCGGTTTCGCGTTCCTTTTTTCGATTTAAGACCCTCGAAA
AACTGAGTTTTGACGCAAAA

Downstream 100 bases:

>100_bases
AGGCGAGCGCGCAGCGCGGCTCATACCTTGCGCAGGGCCAGCACCGCGTTCATGCCGCCAAAGGCAAAAGCGTTGGACAG
TGCGACGGTGACATCGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Invasion Associated Locus B Family Protein; Invasion Associated Locus B; Invasion Associated Locus B Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKAGRLTGFCDHARALANIQDGATMSRTSRSPFARALLIAAFLTAPMTLFAQDAKEGGLTGEGLALGTEIDDTPRPGDTY
IKETFQDWSLRCVVVADADDLCQMYQLLSDSNGSPVAEFTAFRLPEGGQAAAGATIVVPLETALVEQLAIKVDDAAGRKY
PYAYCNTIGCYARIGLTQADVEAYKRGAEAVLSIVPIAAPDQRVNVTLSLKGFTAAFEASSYLTQ

Sequences:

>Translated_225_residues
MKAGRLTGFCDHARALANIQDGATMSRTSRSPFARALLIAAFLTAPMTLFAQDAKEGGLTGEGLALGTEIDDTPRPGDTY
IKETFQDWSLRCVVVADADDLCQMYQLLSDSNGSPVAEFTAFRLPEGGQAAAGATIVVPLETALVEQLAIKVDDAAGRKY
PYAYCNTIGCYARIGLTQADVEAYKRGAEAVLSIVPIAAPDQRVNVTLSLKGFTAAFEASSYLTQ
>Mature_225_residues
MKAGRLTGFCDHARALANIQDGATMSRTSRSPFARALLIAAFLTAPMTLFAQDAKEGGLTGEGLALGTEIDDTPRPGDTY
IKETFQDWSLRCVVVADADDLCQMYQLLSDSNGSPVAEFTAFRLPEGGQAAAGATIVVPLETALVEQLAIKVDDAAGRKY
PYAYCNTIGCYARIGLTQADVEAYKRGAEAVLSIVPIAAPDQRVNVTLSLKGFTAAFEASSYLTQ

Specific function: Unknown

COG id: COG5342

COG function: function code R; Invasion protein B, involved in pathogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23912; Mature: 23912

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGRLTGFCDHARALANIQDGATMSRTSRSPFARALLIAAFLTAPMTLFAQDAKEGGLT
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEGLALGTEIDDTPRPGDTYIKETFQDWSLRCVVVADADDLCQMYQLLSDSNGSPVAEFT
CCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHH
AFRLPEGGQAAAGATIVVPLETALVEQLAIKVDDAAGRKYPYAYCNTIGCYARIGLTQAD
EEECCCCCCCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
VEAYKRGAEAVLSIVPIAAPDQRVNVTLSLKGFTAAFEASSYLTQ
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEHHHHHHHCCC
>Mature Secondary Structure
MKAGRLTGFCDHARALANIQDGATMSRTSRSPFARALLIAAFLTAPMTLFAQDAKEGGLT
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GEGLALGTEIDDTPRPGDTYIKETFQDWSLRCVVVADADDLCQMYQLLSDSNGSPVAEFT
CCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCHHHHH
AFRLPEGGQAAAGATIVVPLETALVEQLAIKVDDAAGRKYPYAYCNTIGCYARIGLTQAD
EEECCCCCCCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCHHH
VEAYKRGAEAVLSIVPIAAPDQRVNVTLSLKGFTAAFEASSYLTQ
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA