Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 110679779

GI number: 110679779

Start: 2432905

End: 2433183

Strand: Direct

Name: yajC [H]

Synonym: RD1_2543

Alternate gene names: 110679779

Gene position: 2432905-2433183 (Clockwise)

Preceding gene: 110679776

Following gene: 110679780

Centisome position: 58.86

GC content: 54.12

Gene sequence:

>279_bases
ATGGAAGCATTCGCCCAGTTCGTACCACTTATTCTGATCTTTGCGATCATGTATTTCCTGCTGATCCGGCCACAGCAAAA
AAAGGTTAAGGAACATCAGGCAATGGTGGCGGCTTTGCGTCGGGGCGATCAGGTCGTCACGCAGGGCGGTATTCTCGGCA
AGGTGGTCAAGGTCAAGGATGACGGCGAGCTTGAGCTTGAAATCGCCGACGGCGTCAAGGTCAGGGTGATCCAGAACACA
ATCGCGACCGTGGTCTCGAAAACGGAACCGGCGAAGTAA

Upstream 100 bases:

>100_bases
ACGGTCTGCCTTGCAAAGCGCGGCATCAGACCATAGGTTCCGCCAAAATTCGCGTGTCGCGGAAGTGACGTGGTACGCCA
TCATGTAAAGGACCCTGTTC

Downstream 100 bases:

>100_bases
GACCGCCTTACAACGGCTTGAAAAGGCGTCACTATGCTGCAGATTGATCTTTGGAAACGGATCACGATCCTCTTGACATG
TGTGGCCGGACTTTGGCTTG

Product: preprotein translocase, YajC subunit, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MEAFAQFVPLILIFAIMYFLLIRPQQKKVKEHQAMVAALRRGDQVVTQGGILGKVVKVKDDGELELEIADGVKVRVIQNT
IATVVSKTEPAK

Sequences:

>Translated_92_residues
MEAFAQFVPLILIFAIMYFLLIRPQQKKVKEHQAMVAALRRGDQVVTQGGILGKVVKVKDDGELELEIADGVKVRVIQNT
IATVVSKTEPAK
>Mature_92_residues
MEAFAQFVPLILIFAIMYFLLIRPQQKKVKEHQAMVAALRRGDQVVTQGGILGKVVKVKDDGELELEIADGVKVRVIQNT
IATVVSKTEPAK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=89, Percent_Identity=35.9550561797753, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 10189; Mature: 10189

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFAQFVPLILIFAIMYFLLIRPQQKKVKEHQAMVAALRRGDQVVTQGGILGKVVKVKD
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECC
DGELELEIADGVKVRVIQNTIATVVSKTEPAK
CCCEEEEECCCEEEEHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEAFAQFVPLILIFAIMYFLLIRPQQKKVKEHQAMVAALRRGDQVVTQGGILGKVVKVKD
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECC
DGELELEIADGVKVRVIQNTIATVVSKTEPAK
CCCEEEEECCCEEEEHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]