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The map label for this gene is 110679735

Identifier: 110679735

GI number: 110679735

Start: 2382869

End: 2383438

Strand: Reverse

Name: 110679735

Synonym: RD1_2496

Alternate gene names: NA

Gene position: 2383438-2382869 (Counterclockwise)

Preceding gene: 110679739

Following gene: 110679734

Centisome position: 57.67

GC content: 57.02

Gene sequence:

>570_bases
TTGGGACGAAGATCAAGCATCGGGGAGGAAGACCTGATCAAAGCGCTTTCGCGCGTGTTTCGTGACATGGGGTATGAAGG
AGCAACGCTGTCCTCTTTGTCGCAGGAGACCGGCCTTCGACGCGCAAGTCTCTATCATCGGTTTCCCAGCGGAAAGGAGC
AGATGGCGCAGGAAGTCCTGGCCGCCTCTGAAAACTGGCTGACGGAGAACCTCTTTGAGCCGCTGAAGGGCGATGCTCCA
GCCGAGCAGCGTCTACAAGCGATGACCCGCAAGCTGGATGCGCTCTACTCAAGTGGCAAACAGGCTTGCATTCTGAACAT
GCTCAGCTCCGCCAACGGTGGTGACAATCCCTTTGCGGCGGCGATCAAAAGGATCTTCAACGCCCTGATTGATTCATTTG
CCACCCTCGCAGAGGAACAAGGTTTTGACAAATCAGGCGCAAGGGCGCGCGCCGAACGTGCCGTCATGTTGTTGCATGGC
AGTTTGGTCCTGTCGCGGGGGATGGGATCGCAAGCACCCTTCGAACGGTTTCTTGAAACGCTGCCTGATGAACTGCTCGG
GCGTCCATAG

Upstream 100 bases:

>100_bases
CGAACGAACGTTCAATTATTGAGTAACGGACGGCAATGATACTGACAACTATATTTGACCGTTCGTTCGGTAACGTGTTA
GTGATCTGGAGGATCTGCAT

Downstream 100 bases:

>100_bases
CACGCGACCGGGGTCCTTGGCTGGCCTTATCGGCAGGGTTTTTTCCCGCGCTGTTTACCACCTTTGCAAGTGGTCTGGTA
TTACTGGATAATCCGCCACA

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MGRRSSIGEEDLIKALSRVFRDMGYEGATLSSLSQETGLRRASLYHRFPSGKEQMAQEVLAASENWLTENLFEPLKGDAP
AEQRLQAMTRKLDALYSSGKQACILNMLSSANGGDNPFAAAIKRIFNALIDSFATLAEEQGFDKSGARARAERAVMLLHG
SLVLSRGMGSQAPFERFLETLPDELLGRP

Sequences:

>Translated_189_residues
MGRRSSIGEEDLIKALSRVFRDMGYEGATLSSLSQETGLRRASLYHRFPSGKEQMAQEVLAASENWLTENLFEPLKGDAP
AEQRLQAMTRKLDALYSSGKQACILNMLSSANGGDNPFAAAIKRIFNALIDSFATLAEEQGFDKSGARARAERAVMLLHG
SLVLSRGMGSQAPFERFLETLPDELLGRP
>Mature_188_residues
GRRSSIGEEDLIKALSRVFRDMGYEGATLSSLSQETGLRRASLYHRFPSGKEQMAQEVLAASENWLTENLFEPLKGDAPA
EQRLQAMTRKLDALYSSGKQACILNMLSSANGGDNPFAAAIKRIFNALIDSFATLAEEQGFDKSGARARAERAVMLLHGS
LVLSRGMGSQAPFERFLETLPDELLGRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20713; Mature: 20582

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRSSIGEEDLIKALSRVFRDMGYEGATLSSLSQETGLRRASLYHRFPSGKEQMAQEVL
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AASENWLTENLFEPLKGDAPAEQRLQAMTRKLDALYSSGKQACILNMLSSANGGDNPFAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
AIKRIFNALIDSFATLAEEQGFDKSGARARAERAVMLLHGSLVLSRGMGSQAPFERFLET
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LPDELLGRP
CCHHHCCCC
>Mature Secondary Structure 
GRRSSIGEEDLIKALSRVFRDMGYEGATLSSLSQETGLRRASLYHRFPSGKEQMAQEVL
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AASENWLTENLFEPLKGDAPAEQRLQAMTRKLDALYSSGKQACILNMLSSANGGDNPFAA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
AIKRIFNALIDSFATLAEEQGFDKSGARARAERAVMLLHGSLVLSRGMGSQAPFERFLET
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LPDELLGRP
CCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA