Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679719

Identifier: 110679719

GI number: 110679719

Start: 2357012

End: 2357266

Strand: Reverse

Name: 110679719

Synonym: RD1_2475

Alternate gene names: NA

Gene position: 2357266-2357012 (Counterclockwise)

Preceding gene: 110679727

Following gene: 110679718

Centisome position: 57.03

GC content: 54.9

Gene sequence:

>255_bases
ATGCGTACTGGATTTATCATCGCTGGCGTCGCTGCTGCGGCCGCAATCGGTTTCGGCATCTATATGGTCGATGTGGACAT
GACAGAAGAAGCCTCGCTCCCCGAGGTGGATCTGTCCATCGAGGGAGGCAACGTGCCCGAATTCGACGTGCAAACCGGTG
ACATCGAGCTGGGCACAGAAGAGGTGACTATGGAGGTGCCGAAAATCGAGATCGAGACACCAGAAGAAGACAACCGCGTC
GCCGATAATCAATAA

Upstream 100 bases:

>100_bases
CGGACAACCCACGAGATGCCCGCATTGTTCCAAAGAAAATATCAGGAACTGATTTTGGACCCGTTCGTTGAATGGGCAGA
ACCAAAGAGGAGTTTTAAAA

Downstream 100 bases:

>100_bases
ACACCTGCGACCTTAAAATACACCATGCACCGCTTCGAGATGAAGCGGTGCATTTTTTGATACGCCGCGCCCATAAAAAA
ATCCGCCCGGAACACATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MRTGFIIAGVAAAAAIGFGIYMVDVDMTEEASLPEVDLSIEGGNVPEFDVQTGDIELGTEEVTMEVPKIEIETPEEDNRV
ADNQ

Sequences:

>Translated_84_residues
MRTGFIIAGVAAAAAIGFGIYMVDVDMTEEASLPEVDLSIEGGNVPEFDVQTGDIELGTEEVTMEVPKIEIETPEEDNRV
ADNQ
>Mature_84_residues
MRTGFIIAGVAAAAAIGFGIYMVDVDMTEEASLPEVDLSIEGGNVPEFDVQTGDIELGTEEVTMEVPKIEIETPEEDNRV
ADNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9002; Mature: 9002

Theoretical pI: Translated: 3.37; Mature: 3.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGFIIAGVAAAAAIGFGIYMVDVDMTEEASLPEVDLSIEGGNVPEFDVQTGDIELGTE
CCCCEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCEECCCCCCEEECCC
EVTMEVPKIEIETPEEDNRVADNQ
EEEEECCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRTGFIIAGVAAAAAIGFGIYMVDVDMTEEASLPEVDLSIEGGNVPEFDVQTGDIELGTE
CCCCEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEECCCCCEECCCCCCEEECCC
EVTMEVPKIEIETPEEDNRVADNQ
EEEEECCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA