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The map label for this gene is napA

Identifier: 110679685

GI number: 110679685

Start: 2322735

End: 2324381

Strand: Direct

Name: napA

Synonym: RD1_2440

Alternate gene names: NA

Gene position: 2322735-2324381 (Clockwise)

Preceding gene: 110679684

Following gene: 110679686

Centisome position: 56.2

GC content: 57.62

Gene sequence:

>1647_bases
ATGAAAATCTCAACTCTGTTCCGGGTTCAGGACCGCGCCATTCGCGCGCTGCACCTGACCTGGATCGCTTTCTTTATTAC
CTTTTATGTCTGGTTCAACATGGCCCCGCTGGCATCTTCGATGTTGGCGGCAAATGATTGGCTTACCAAGGATGACATCA
AGCTCTTCGCCATCGCAAACGTGGCGTTGACGATCCCGGCCCGGATCCTTGTTGGGCTGGCGCTCGACAAATACGGCCCG
CGCCGTGTGTTCTCGATCCTCATGGTCGTGATGGCCGTGCCGACGCTCTTCTTCGCCTTTGGCGACACCAAGATGCAGCT
CTTTGTCTCGCGTCTGATCATGTCGTCTGTCGGCGCAGGTTTCGTTGTCGGTATTCACATGACAGCCCTTTGGTTCAAGC
CGCGTGACATCGGCTTTGCCGAAGGGTTCTACGCGGGCTGGGGCAACTTCGGTTCCGCTGCTGCGGCTCTGACCATTCCG
ACAATCGCTCTGAACATGTTCGGTGGCGATGATGGCTGGCGCTACGCGATTGCCATGTCGGGCATCATCATGGCGGCCTA
TGGCGTGTTCTACTGGTTCGCGATCACTGACGGTCCGAACCCCGACACCCACAAGAAGGCAAAGGGTTCAGCACTTGAGG
TTTCGACCTACAAGGATCTGGTGCTGCTGGTCATCTTCACCGTGCCGCTGATCGGGATTTTGTCGATCCTCATCTACCGT
GTGCAGATGATGGGTTATATCGATGGCTTCGTTGCAACCATCTGCTACGCCTCGATTGCAACCCTGGTTGTCTATCAGGT
CTGGCAAGTGCTGCGCACCAACCTGCCGATCCTTCGCAAAGGTGTTCCCGAGGATGACAAGTATCCCTTCAGCTCGGTCG
CAGCGCTCAACACCACCTATTTCGCGAACTTCGGTGCGGAACTGGCGGTCGTGTCGATGCTGCCGATGTTCTTTCAGGAA
ACCTGGGGGCTGACAGCAGTCGTCGCTGGTCTGATCGCGGCCTCCTTTGCCTTCATCAACCTCGTGGCGCGTCCGATGGG
CGGTTTGGTCTCAGACCGCATGGGCAACCGCCGCTTTGTGATGCTGGCCTATATGCTGGGGATTGCCATCGGTTTTGCGC
TCATGGGCCTGTTGAACAGCGAATGGCCTCTGATCATCGCGATCGCCATCACAATCGCTTGCTCGTTCTTCGTGCAGGGG
GCGGAGGGGGCAACCTTCGGCATCATCCCCTCGATCAAGCGTCGGGTGACCGGACAGATTGCCGGCATGGCCGGGGCCTA
CGGCAACGTTGGCGCGGTGTTCTACCTCTTCATCTTCACCTTTGTCGACACGCAGACCTTCTTCTTCATCATCGCCTGTG
GTGCGCTGATCTCCTGGGTTGTCTGCTTCTTCTGGCTGAAGGAACCGGAAGGTGGCTTTGGGGAAGAGTACGTCCTCAGT
TCTGTTGACCAGGCCATCGCAGCGGAAGCCACGCGCAAGAAAGAGGCCGAAGCTGAACTCGCCTTGATCTTTGAGGGCTC
CGAGAAGGTGGCACTCGCCGAGAAAGGCAACGGCCTGACCGTCACCGCAAGGTTCAAGGACCTTGACGATCTCAAGACCG
CTTTGGCCCGACTAGGTCCAAACGGCAGCCAGCAACCGGCTGAATGA

Upstream 100 bases:

>100_bases
CTTTCTGGCGCGGCGCGCCAAGTGCCCAATTCTCATAATTCCAACCCACGTCCCCGCATCTTCGATGCAGGCGGCCGAAT
AAACCCGGGGGACACTACCG

Downstream 100 bases:

>100_bases
ACGCATGGCCGGCCGGGCAAGGTGGCCCGGCCGGCCCCCCGAAACCGCCGACAGGGGAGGATTTACCCATGGCGATTACA
GACACCTCAAATGGCAGCAG

Product: nitrate permease

Products: NA

Alternate protein names: Facilitator Transporter; Nitrite Transporter; Nitrate/Nitrite Transporter; MFS Superfamily Nitrate Transporter Transmembrane Protein; Nitrite Transporter Subfamily; Nitrate Permease; Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; High-Affinity Nitrate Transporter; Nitrate Permease NapA; MFS Nitrate/Nitrite Transporter; MFS Family Nitrate Transporter; Nitrite Extrusion NarK; High-Affinity Nitrate/Nitrite Bispecific Transporter; Nitrate/Nitrite Transporter Of MFS; Nitrate/Nitrite Transporter/Facilitator; High Affinity Nitrate Transporter Protein; MFS Family Nitrate/Nitrite Transporter; Nitrite Transporter NrtP

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MKISTLFRVQDRAIRALHLTWIAFFITFYVWFNMAPLASSMLAANDWLTKDDIKLFAIANVALTIPARILVGLALDKYGP
RRVFSILMVVMAVPTLFFAFGDTKMQLFVSRLIMSSVGAGFVVGIHMTALWFKPRDIGFAEGFYAGWGNFGSAAAALTIP
TIALNMFGGDDGWRYAIAMSGIIMAAYGVFYWFAITDGPNPDTHKKAKGSALEVSTYKDLVLLVIFTVPLIGILSILIYR
VQMMGYIDGFVATICYASIATLVVYQVWQVLRTNLPILRKGVPEDDKYPFSSVAALNTTYFANFGAELAVVSMLPMFFQE
TWGLTAVVAGLIAASFAFINLVARPMGGLVSDRMGNRRFVMLAYMLGIAIGFALMGLLNSEWPLIIAIAITIACSFFVQG
AEGATFGIIPSIKRRVTGQIAGMAGAYGNVGAVFYLFIFTFVDTQTFFFIIACGALISWVVCFFWLKEPEGGFGEEYVLS
SVDQAIAAEATRKKEAEAELALIFEGSEKVALAEKGNGLTVTARFKDLDDLKTALARLGPNGSQQPAE

Sequences:

>Translated_548_residues
MKISTLFRVQDRAIRALHLTWIAFFITFYVWFNMAPLASSMLAANDWLTKDDIKLFAIANVALTIPARILVGLALDKYGP
RRVFSILMVVMAVPTLFFAFGDTKMQLFVSRLIMSSVGAGFVVGIHMTALWFKPRDIGFAEGFYAGWGNFGSAAAALTIP
TIALNMFGGDDGWRYAIAMSGIIMAAYGVFYWFAITDGPNPDTHKKAKGSALEVSTYKDLVLLVIFTVPLIGILSILIYR
VQMMGYIDGFVATICYASIATLVVYQVWQVLRTNLPILRKGVPEDDKYPFSSVAALNTTYFANFGAELAVVSMLPMFFQE
TWGLTAVVAGLIAASFAFINLVARPMGGLVSDRMGNRRFVMLAYMLGIAIGFALMGLLNSEWPLIIAIAITIACSFFVQG
AEGATFGIIPSIKRRVTGQIAGMAGAYGNVGAVFYLFIFTFVDTQTFFFIIACGALISWVVCFFWLKEPEGGFGEEYVLS
SVDQAIAAEATRKKEAEAELALIFEGSEKVALAEKGNGLTVTARFKDLDDLKTALARLGPNGSQQPAE
>Mature_548_residues
MKISTLFRVQDRAIRALHLTWIAFFITFYVWFNMAPLASSMLAANDWLTKDDIKLFAIANVALTIPARILVGLALDKYGP
RRVFSILMVVMAVPTLFFAFGDTKMQLFVSRLIMSSVGAGFVVGIHMTALWFKPRDIGFAEGFYAGWGNFGSAAAALTIP
TIALNMFGGDDGWRYAIAMSGIIMAAYGVFYWFAITDGPNPDTHKKAKGSALEVSTYKDLVLLVIFTVPLIGILSILIYR
VQMMGYIDGFVATICYASIATLVVYQVWQVLRTNLPILRKGVPEDDKYPFSSVAALNTTYFANFGAELAVVSMLPMFFQE
TWGLTAVVAGLIAASFAFINLVARPMGGLVSDRMGNRRFVMLAYMLGIAIGFALMGLLNSEWPLIIAIAITIACSFFVQG
AEGATFGIIPSIKRRVTGQIAGMAGAYGNVGAVFYLFIFTFVDTQTFFFIIACGALISWVVCFFWLKEPEGGFGEEYVLS
SVDQAIAAEATRKKEAEAELALIFEGSEKVALAEKGNGLTVTARFKDLDDLKTALARLGPNGSQQPAE

Specific function: Unknown

COG id: COG2223

COG function: function code P; Nitrate/nitrite transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59799; Mature: 59799

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTLFRVQDRAIRALHLTWIAFFITFYVWFNMAPLASSMLAANDWLTKDDIKLFAIAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
VALTIPARILVGLALDKYGPRRVFSILMVVMAVPTLFFAFGDTKMQLFVSRLIMSSVGAG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
FVVGIHMTALWFKPRDIGFAEGFYAGWGNFGSAAAALTIPTIALNMFGGDDGWRYAIAMS
HHHHEEHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCEEHHHHH
GIIMAAYGVFYWFAITDGPNPDTHKKAKGSALEVSTYKDLVLLVIFTVPLIGILSILIYR
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VQMMGYIDGFVATICYASIATLVVYQVWQVLRTNLPILRKGVPEDDKYPFSSVAALNTTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHH
FANFGAELAVVSMLPMFFQETWGLTAVVAGLIAASFAFINLVARPMGGLVSDRMGNRRFV
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHH
MLAYMLGIAIGFALMGLLNSEWPLIIAIAITIACSFFVQGAEGATFGIIPSIKRRVTGQI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHH
AGMAGAYGNVGAVFYLFIFTFVDTQTFFFIIACGALISWVVCFFWLKEPEGGFGEEYVLS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SVDQAIAAEATRKKEAEAELALIFEGSEKVALAEKGNGLTVTARFKDLDDLKTALARLGP
HHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCC
NGSQQPAE
CCCCCCCC
>Mature Secondary Structure
MKISTLFRVQDRAIRALHLTWIAFFITFYVWFNMAPLASSMLAANDWLTKDDIKLFAIAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
VALTIPARILVGLALDKYGPRRVFSILMVVMAVPTLFFAFGDTKMQLFVSRLIMSSVGAG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
FVVGIHMTALWFKPRDIGFAEGFYAGWGNFGSAAAALTIPTIALNMFGGDDGWRYAIAMS
HHHHEEHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCEEHHHHH
GIIMAAYGVFYWFAITDGPNPDTHKKAKGSALEVSTYKDLVLLVIFTVPLIGILSILIYR
HHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
VQMMGYIDGFVATICYASIATLVVYQVWQVLRTNLPILRKGVPEDDKYPFSSVAALNTTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHH
FANFGAELAVVSMLPMFFQETWGLTAVVAGLIAASFAFINLVARPMGGLVSDRMGNRRFV
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHH
MLAYMLGIAIGFALMGLLNSEWPLIIAIAITIACSFFVQGAEGATFGIIPSIKRRVTGQI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHH
AGMAGAYGNVGAVFYLFIFTFVDTQTFFFIIACGALISWVVCFFWLKEPEGGFGEEYVLS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
SVDQAIAAEATRKKEAEAELALIFEGSEKVALAEKGNGLTVTARFKDLDDLKTALARLGP
HHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCC
NGSQQPAE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA