Click here to switch to the map view.

The map label for this gene is 110679684

Identifier: 110679684

GI number: 110679684

Start: 2322219

End: 2322716

Strand: Direct

Name: 110679684

Synonym: RD1_2439

Alternate gene names: NA

Gene position: 2322219-2322716 (Clockwise)

Preceding gene: 110679681

Following gene: 110679685

Centisome position: 56.19

GC content: 57.83

Gene sequence:

>498_bases
ATGGAAATAATGCTTGCGTACGACCATTCGCGCAACGCGCGAATTGCGCTCGGCGCAATTCAGCAGATGTTCGGACCGTT
GAAACCCAGCGTTACGCTGGTGTCGGTCGTTGAGGATATCGGGAGCGCCACATCGGGTGCGGACGAGCTTTTCACCGAAC
AGTATCAGGATCAGAAAGCGGGCGTTGAAGCGGCGGCCGCCGAATTGATGGCAGCAGGCTTTGACGCGAAGGTCATGCTT
GCAGAAGGTGACGCGCGCAAGATGATCTTGCGCGCGACAGAGGAACGTCAGCCGGACCTTTTGGTTATGGCGCGTCACAG
CCATCACGCAGATGGGGGGCCGTTGGGGTTCATCACCAAAAAGCTCGACGCGCTTGTCGAGGAATTTGACCACATGACCT
TTGGCTCTGTGTCGGCCTTTCTGGCGCGGCGCGCCAAGTGCCCAATTCTCATAATTCCAACCCACGTCCCCGCATCTTCG
ATGCAGGCGGCCGAATAA

Upstream 100 bases:

>100_bases
CAAATATTGATCCAGATCAACAAGAATTCACAACGGCCACCTCACACAGTTTCTGAACTTCAAATCACCCAATTCCGGGT
GCGTCAGAACGGAGGAACCG

Downstream 100 bases:

>100_bases
ACCCGGGGGACACTACCGATGAAAATCTCAACTCTGTTCCGGGTTCAGGACCGCGCCATTCGCGCGCTGCACCTGACCTG
GATCGCTTTCTTTATTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MEIMLAYDHSRNARIALGAIQQMFGPLKPSVTLVSVVEDIGSATSGADELFTEQYQDQKAGVEAAAAELMAAGFDAKVML
AEGDARKMILRATEERQPDLLVMARHSHHADGGPLGFITKKLDALVEEFDHMTFGSVSAFLARRAKCPILIIPTHVPASS
MQAAE

Sequences:

>Translated_165_residues
MEIMLAYDHSRNARIALGAIQQMFGPLKPSVTLVSVVEDIGSATSGADELFTEQYQDQKAGVEAAAAELMAAGFDAKVML
AEGDARKMILRATEERQPDLLVMARHSHHADGGPLGFITKKLDALVEEFDHMTFGSVSAFLARRAKCPILIIPTHVPASS
MQAAE
>Mature_165_residues
MEIMLAYDHSRNARIALGAIQQMFGPLKPSVTLVSVVEDIGSATSGADELFTEQYQDQKAGVEAAAAELMAAGFDAKVML
AEGDARKMILRATEERQPDLLVMARHSHHADGGPLGFITKKLDALVEEFDHMTFGSVSAFLARRAKCPILIIPTHVPASS
MQAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17781; Mature: 17781

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIMLAYDHSRNARIALGAIQQMFGPLKPSVTLVSVVEDIGSATSGADELFTEQYQDQKA
CEEEEEECCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GVEAAAAELMAAGFDAKVMLAEGDARKMILRATEERQPDLLVMARHSHHADGGPLGFITK
CHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHH
KLDALVEEFDHMTFGSVSAFLARRAKCPILIIPTHVPASSMQAAE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MEIMLAYDHSRNARIALGAIQQMFGPLKPSVTLVSVVEDIGSATSGADELFTEQYQDQKA
CEEEEEECCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GVEAAAAELMAAGFDAKVMLAEGDARKMILRATEERQPDLLVMARHSHHADGGPLGFITK
CHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHH
KLDALVEEFDHMTFGSVSAFLARRAKCPILIIPTHVPASSMQAAE
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA