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The map label for this gene is 110679677

Identifier: 110679677

GI number: 110679677

Start: 2317649

End: 2318560

Strand: Direct

Name: 110679677

Synonym: RD1_2431

Alternate gene names: NA

Gene position: 2317649-2318560 (Clockwise)

Preceding gene: 110679676

Following gene: 110679678

Centisome position: 56.08

GC content: 58.55

Gene sequence:

>912_bases
ATGACTTACCCCCGAGATTTTGTTGGCTATGGCGCCAACCCGCCGGATCCGAAATGGCCAAATGGCGCGCGTGTCGCTAT
CAATTTTGTGATGAACTACGAAGAGGGGTCCGAGCCGTCGATTCAGGATGGTGAGGGCTTTACCGAGGTCGCACTGACAG
ACGCCCACGGCCTTGATCAAGCGGTCAAGGGGCGTGATCTGGCGGGCGAAGGGCTCTTTGCCTATGGCAGCCGCGTGGGG
TTCTGGCGGCTGATGCGGCTTTTTCAGGAGCGCGGGTTGCCCATGACGGTCTTTGGCTGCGCGCTGGCGATCGAGCGGAA
CCGGCAAGCGGCGCAAGCCATTCGCGATTCTGGATTTGACTGTTGCTGCCATGGCTGGCGCTGGGTCAAGCACTTTGAGT
TGAGTGAAGACGAAGAGCGAGACCATATCAAACGTGCCATCGCTTCACTGCGGGAAACCTTGGGCGAGCGGCCCCTTGGA
TGGTACTGCCGCTATGGTCCCAGCGTAAACACCCGCAAGCTGGTGGTGGAGGAGGGCGGTTTCCTCTACGATTCAGACGC
TTACGACGATGAATTGCCCTATTGGACCAAAGTCGCTGGCAAACCGCATCTGGTCGTTCCCTATTCGCTGACCAACAATG
ATGCGAAATTCTGCGGATCCTTTGCGACGTCCAACGATTACTTCGAGTGGCACAAGGATGCCTTCGACATGCTCTACCGG
GAAGGGGCGAGCGCGCCCAAGATGATGTCGGTCGGGCTGCACATGCGGCTGATCGGGCATCCCGCGCGGGCCGTGGGCTT
GGAACGTTTCCTCGATTATGTTGCCGGTCATGACGATGTCTGGATCACGCGGCGGCTGGATATCGCCCATCATTGGGCCA
AAACACATCCCTATTCCGGACCTCTTGGATGA

Upstream 100 bases:

>100_bases
GCCGCGATTTCCGGTGTGATCATCATCGCCGTGCTCGTGTTGATGATTGTGATGGATCGATTGACCGGCCTGACGCGCCG
GATGAGTATGTGAGGCCCAG

Downstream 100 bases:

>100_bases
GCGGCACGCGACACCAGATCGTCGTTGCATTGGGTGACACCCGCTACCGCGTGGATCGACCCTTTGGGACGTGGCCGCAA
ACCGCCGGTAAGGTGTCGGA

Product: polysaccharide deacetylase family protein, putative

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Domain Protein; Chitooligosaccharide Deacetylase Protein; Uricase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Deacetylase

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTYPRDFVGYGANPPDPKWPNGARVAINFVMNYEEGSEPSIQDGEGFTEVALTDAHGLDQAVKGRDLAGEGLFAYGSRVG
FWRLMRLFQERGLPMTVFGCALAIERNRQAAQAIRDSGFDCCCHGWRWVKHFELSEDEERDHIKRAIASLRETLGERPLG
WYCRYGPSVNTRKLVVEEGGFLYDSDAYDDELPYWTKVAGKPHLVVPYSLTNNDAKFCGSFATSNDYFEWHKDAFDMLYR
EGASAPKMMSVGLHMRLIGHPARAVGLERFLDYVAGHDDVWITRRLDIAHHWAKTHPYSGPLG

Sequences:

>Translated_303_residues
MTYPRDFVGYGANPPDPKWPNGARVAINFVMNYEEGSEPSIQDGEGFTEVALTDAHGLDQAVKGRDLAGEGLFAYGSRVG
FWRLMRLFQERGLPMTVFGCALAIERNRQAAQAIRDSGFDCCCHGWRWVKHFELSEDEERDHIKRAIASLRETLGERPLG
WYCRYGPSVNTRKLVVEEGGFLYDSDAYDDELPYWTKVAGKPHLVVPYSLTNNDAKFCGSFATSNDYFEWHKDAFDMLYR
EGASAPKMMSVGLHMRLIGHPARAVGLERFLDYVAGHDDVWITRRLDIAHHWAKTHPYSGPLG
>Mature_302_residues
TYPRDFVGYGANPPDPKWPNGARVAINFVMNYEEGSEPSIQDGEGFTEVALTDAHGLDQAVKGRDLAGEGLFAYGSRVGF
WRLMRLFQERGLPMTVFGCALAIERNRQAAQAIRDSGFDCCCHGWRWVKHFELSEDEERDHIKRAIASLRETLGERPLGW
YCRYGPSVNTRKLVVEEGGFLYDSDAYDDELPYWTKVAGKPHLVVPYSLTNNDAKFCGSFATSNDYFEWHKDAFDMLYRE
GASAPKMMSVGLHMRLIGHPARAVGLERFLDYVAGHDDVWITRRLDIAHHWAKTHPYSGPLG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34319; Mature: 34188

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPRDFVGYGANPPDPKWPNGARVAINFVMNYEEGSEPSIQDGEGFTEVALTDAHGLDQ
CCCCCCHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
AVKGRDLAGEGLFAYGSRVGFWRLMRLFQERGLPMTVFGCALAIERNRQAAQAIRDSGFD
HHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHCCCH
CCCHGWRWVKHFELSEDEERDHIKRAIASLRETLGERPLGWYCRYGPSVNTRKLVVEEGG
HHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCC
FLYDSDAYDDELPYWTKVAGKPHLVVPYSLTNNDAKFCGSFATSNDYFEWHKDAFDMLYR
EEECCCCCCCCCCCCEEECCCCEEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
EGASAPKMMSVGLHMRLIGHPARAVGLERFLDYVAGHDDVWITRRLDIAHHWAKTHPYSG
CCCCCCHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC
PLG
CCC
>Mature Secondary Structure 
TYPRDFVGYGANPPDPKWPNGARVAINFVMNYEEGSEPSIQDGEGFTEVALTDAHGLDQ
CCCCCHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH
AVKGRDLAGEGLFAYGSRVGFWRLMRLFQERGLPMTVFGCALAIERNRQAAQAIRDSGFD
HHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHCCCH
CCCHGWRWVKHFELSEDEERDHIKRAIASLRETLGERPLGWYCRYGPSVNTRKLVVEEGG
HHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCC
FLYDSDAYDDELPYWTKVAGKPHLVVPYSLTNNDAKFCGSFATSNDYFEWHKDAFDMLYR
EEECCCCCCCCCCCCEEECCCCEEEEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
EGASAPKMMSVGLHMRLIGHPARAVGLERFLDYVAGHDDVWITRRLDIAHHWAKTHPYSG
CCCCCCHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC
PLG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA