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The map label for this gene is 110679670

Identifier: 110679670

GI number: 110679670

Start: 2310548

End: 2311435

Strand: Direct

Name: 110679670

Synonym: RD1_2422

Alternate gene names: NA

Gene position: 2310548-2311435 (Clockwise)

Preceding gene: 110679669

Following gene: 110679671

Centisome position: 55.9

GC content: 64.08

Gene sequence:

>888_bases
ATGACCCGTGACCTTATCGGCTATGGCGGCGCATGGCCCGCCCTGACCTGGCCGGGCGGGTCAAAACTCGCGGTTTCCGT
TGTGGTCAATTTCGAGGAAGGGGCAGAGCAGCAGGTGATAGATGGCGATCCGGTCAGTGAACGGATGGGCGAGGTGATCT
CCGTCGTGCCGGAGGGCAAACCGGATCCCGGGCAGGCGCAGATCTTTGCCTATGGCACCCGCGCGGGTGCGTGGCGTATG
GCAGATGCCTTGCGGCAGTACCGCGTACCGGCGACTGTTTTCGCCTGTGGGCGCGCGGCCGAACGCGCAGCACCTGTTTT
GCAAGTGTTTTGCGAGGATGGCCATGAAACCGCCTGCCACGGCTGGCTCTGGCGGCCGCATGCCGACTATGACACCGCCG
AAGCCGAAGCCGAGGATCTGGATCGCGCAACAGCAGCGATTGCAAAAGTCACCGGTGCCGCGCCGGTCGGTTTTTTCTGC
CGGGGTGCCGAAAGCCCATGGACCCGCGACCTGCTAGCGGCGCGTGGGTTTGTGTATACGTCCAACGGGTTTGATGATGA
TCTGCCGTATCGCGATCCCTCCGGGCTGACGGTCGTTCCTTATGCGCTGGACGCCAATGACATGAAGTTCTTCCACCCCA
ACGGTTTCGTGCGGGCGCAGGACATGGTCGATTATGTCACGGATGCGCTGGATGTGCTGGAGGCCGAAGCCGCCCGAGGC
CTGCCGCGTCTGCTCAACATCGGGTTTCACTTGCGCATCGTGGGGCGGCCCGGGCGGTTCAAGGCGTTCGAGCAGATCCT
CGCTGAACTGGACCGCCGCCGCGACCGGCTCTGGCTGGCGCGGCGCATCGACATCGCCGAGGCGTTTGACAAGGCCTGTC
CGGCATGA

Upstream 100 bases:

>100_bases
CGAGCCGTGCCGACATCGCACATGCGTGGCGCAAGGCGATCGGACTGCCAGACTGGCAGCCCCGTCCTTGTCCTGAAACC
TTTGCAACGGATAGTCCCAC

Downstream 100 bases:

>100_bases
TCGCCTTGATCAATCCAAATACGTCGACCGCCACGACCGCCGCTATGCTGCGTATCGCGCAGGAAACGGCAGGGCCCGAC
GTGGACATACACGGCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase; Uricase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Deacetylase

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTRDLIGYGGAWPALTWPGGSKLAVSVVVNFEEGAEQQVIDGDPVSERMGEVISVVPEGKPDPGQAQIFAYGTRAGAWRM
ADALRQYRVPATVFACGRAAERAAPVLQVFCEDGHETACHGWLWRPHADYDTAEAEAEDLDRATAAIAKVTGAAPVGFFC
RGAESPWTRDLLAARGFVYTSNGFDDDLPYRDPSGLTVVPYALDANDMKFFHPNGFVRAQDMVDYVTDALDVLEAEAARG
LPRLLNIGFHLRIVGRPGRFKAFEQILAELDRRRDRLWLARRIDIAEAFDKACPA

Sequences:

>Translated_295_residues
MTRDLIGYGGAWPALTWPGGSKLAVSVVVNFEEGAEQQVIDGDPVSERMGEVISVVPEGKPDPGQAQIFAYGTRAGAWRM
ADALRQYRVPATVFACGRAAERAAPVLQVFCEDGHETACHGWLWRPHADYDTAEAEAEDLDRATAAIAKVTGAAPVGFFC
RGAESPWTRDLLAARGFVYTSNGFDDDLPYRDPSGLTVVPYALDANDMKFFHPNGFVRAQDMVDYVTDALDVLEAEAARG
LPRLLNIGFHLRIVGRPGRFKAFEQILAELDRRRDRLWLARRIDIAEAFDKACPA
>Mature_294_residues
TRDLIGYGGAWPALTWPGGSKLAVSVVVNFEEGAEQQVIDGDPVSERMGEVISVVPEGKPDPGQAQIFAYGTRAGAWRMA
DALRQYRVPATVFACGRAAERAAPVLQVFCEDGHETACHGWLWRPHADYDTAEAEAEDLDRATAAIAKVTGAAPVGFFCR
GAESPWTRDLLAARGFVYTSNGFDDDLPYRDPSGLTVVPYALDANDMKFFHPNGFVRAQDMVDYVTDALDVLEAEAARGL
PRLLNIGFHLRIVGRPGRFKAFEQILAELDRRRDRLWLARRIDIAEAFDKACPA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32402; Mature: 32271

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDLIGYGGAWPALTWPGGSKLAVSVVVNFEEGAEQQVIDGDPVSERMGEVISVVPEGK
CCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEECCCCC
PDPGQAQIFAYGTRAGAWRMADALRQYRVPATVFACGRAAERAAPVLQVFCEDGHETACH
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
GWLWRPHADYDTAEAEAEDLDRATAAIAKVTGAAPVGFFCRGAESPWTRDLLAARGFVYT
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCEEEE
SNGFDDDLPYRDPSGLTVVPYALDANDMKFFHPNGFVRAQDMVDYVTDALDVLEAEAARG
CCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCC
LPRLLNIGFHLRIVGRPGRFKAFEQILAELDRRRDRLWLARRIDIAEAFDKACPA
CHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRDLIGYGGAWPALTWPGGSKLAVSVVVNFEEGAEQQVIDGDPVSERMGEVISVVPEGK
CCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHEECCCCC
PDPGQAQIFAYGTRAGAWRMADALRQYRVPATVFACGRAAERAAPVLQVFCEDGHETACH
CCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
GWLWRPHADYDTAEAEAEDLDRATAAIAKVTGAAPVGFFCRGAESPWTRDLLAARGFVYT
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCEEEE
SNGFDDDLPYRDPSGLTVVPYALDANDMKFFHPNGFVRAQDMVDYVTDALDVLEAEAARG
CCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCC
LPRLLNIGFHLRIVGRPGRFKAFEQILAELDRRRDRLWLARRIDIAEAFDKACPA
CHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA