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The map label for this gene is 110679669

Identifier: 110679669

GI number: 110679669

Start: 2309604

End: 2310551

Strand: Direct

Name: 110679669

Synonym: RD1_2421

Alternate gene names: NA

Gene position: 2309604-2310551 (Clockwise)

Preceding gene: 110679668

Following gene: 110679670

Centisome position: 55.88

GC content: 63.92

Gene sequence:

>948_bases
ATGACGCAGCCGCGCGACTTTGCAGGCTATGCGGGGCACCCCCCCGCGATGCGCTGGCCCAATGGCGCGGGTCTCGCGGT
TTCCATCGTCGTGAATGTGGAAGAAGGCGCGGAGCTTTCCCTTAGCGCGGGGGATGAGCGCAACGAGCATATCTACGAGG
CCGTTGAGCGGGTCGAAGGTCAGCCTGATCTCTGTATGGAGAGCCACTTTGAATATGGGCCGCGCGCGGGATGGCCGCGC
ATTCGCGCGGCGTTGCGCAGTCGCAAGGTGCCTGCCACGCTGAACGCCTGCGGTCGCGCGTTGGAGGCGACGCCGTGGAT
TGCGCGCGAAGCCGTGCAGGACGGACACGAGATCGCGGCCCACGGCTGGCGCTGGGAGCGGCATGTCCACATGGACGAGC
AGACCGAGCGGCGCGCCATCGCGCGCGCCGTGGCAGCCATCGAACGCGTGTCAGGTCGCCCGCCGCTGGGGTGGCATACC
CGGTCCGCCACCTCGCTGCGCACCCGTGATTTGTTGATCGAGCAGGGCGGCTTTCTTTATGACAGCAATGCCTATAATGA
CGACATTCCGTATGTGGTTGATACGGGGCATGGCCCCCATGTGGTGCTGCCCTATGCCTTTGATACCAACGACATGCGGT
ATTACAACAATGGCGGTTTCGTCTTTGCCGAGGATTTCGCGCGCTACTGCATCGCGGGGTTCGACAGGCTGTTGAAGGAA
GCCGACGATGCCCCGCGCATGCTGTCCATTGGCCTGCACACGCGCATTATCGGACGTCCGGCACGTATCGCGGGGCTGGA
GGCTTTTCTGGACCACGCGCTGGCCCGCGAAAACGTCTGGTTCGCGAGCCGTGCCGACATCGCACATGCGTGGCGCAAGG
CGATCGGACTGCCAGACTGGCAGCCCCGTCCTTGTCCTGAAACCTTTGCAACGGATAGTCCCACATGA

Upstream 100 bases:

>100_bases
TCAGCAGTGCCCTGATGCGGCGCGACGCGGCGGCGGATGATGTGATCCAATGGGACGCGGATCTGTGCAAGCGTTTCATG
GACGCGGTCGGGGTGGCGGC

Downstream 100 bases:

>100_bases
CCCGTGACCTTATCGGCTATGGCGGCGCATGGCCCGCCCTGACCTGGCCGGGCGGGTCAAAACTCGCGGTTTCCGTTGTG
GTCAATTTCGAGGAAGGGGC

Product: polysaccharide deacetylase family protein, putative

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Uricase; Polysaccharide Deacetylase Protein Pda4B; Hydrolase; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Deacetylase

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTQPRDFAGYAGHPPAMRWPNGAGLAVSIVVNVEEGAELSLSAGDERNEHIYEAVERVEGQPDLCMESHFEYGPRAGWPR
IRAALRSRKVPATLNACGRALEATPWIAREAVQDGHEIAAHGWRWERHVHMDEQTERRAIARAVAAIERVSGRPPLGWHT
RSATSLRTRDLLIEQGGFLYDSNAYNDDIPYVVDTGHGPHVVLPYAFDTNDMRYYNNGGFVFAEDFARYCIAGFDRLLKE
ADDAPRMLSIGLHTRIIGRPARIAGLEAFLDHALARENVWFASRADIAHAWRKAIGLPDWQPRPCPETFATDSPT

Sequences:

>Translated_315_residues
MTQPRDFAGYAGHPPAMRWPNGAGLAVSIVVNVEEGAELSLSAGDERNEHIYEAVERVEGQPDLCMESHFEYGPRAGWPR
IRAALRSRKVPATLNACGRALEATPWIAREAVQDGHEIAAHGWRWERHVHMDEQTERRAIARAVAAIERVSGRPPLGWHT
RSATSLRTRDLLIEQGGFLYDSNAYNDDIPYVVDTGHGPHVVLPYAFDTNDMRYYNNGGFVFAEDFARYCIAGFDRLLKE
ADDAPRMLSIGLHTRIIGRPARIAGLEAFLDHALARENVWFASRADIAHAWRKAIGLPDWQPRPCPETFATDSPT
>Mature_314_residues
TQPRDFAGYAGHPPAMRWPNGAGLAVSIVVNVEEGAELSLSAGDERNEHIYEAVERVEGQPDLCMESHFEYGPRAGWPRI
RAALRSRKVPATLNACGRALEATPWIAREAVQDGHEIAAHGWRWERHVHMDEQTERRAIARAVAAIERVSGRPPLGWHTR
SATSLRTRDLLIEQGGFLYDSNAYNDDIPYVVDTGHGPHVVLPYAFDTNDMRYYNNGGFVFAEDFARYCIAGFDRLLKEA
DDAPRMLSIGLHTRIIGRPARIAGLEAFLDHALARENVWFASRADIAHAWRKAIGLPDWQPRPCPETFATDSPT

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35245; Mature: 35114

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPRDFAGYAGHPPAMRWPNGAGLAVSIVVNVEEGAELSLSAGDERNEHIYEAVERVEG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCC
QPDLCMESHFEYGPRAGWPRIRAALRSRKVPATLNACGRALEATPWIAREAVQDGHEIAA
CCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
HGWRWERHVHMDEQTERRAIARAVAAIERVSGRPPLGWHTRSATSLRTRDLLIEQGGFLY
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
DSNAYNDDIPYVVDTGHGPHVVLPYAFDTNDMRYYNNGGFVFAEDFARYCIAGFDRLLKE
ECCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHH
ADDAPRMLSIGLHTRIIGRPARIAGLEAFLDHALARENVWFASRADIAHAWRKAIGLPDW
CCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCC
QPRPCPETFATDSPT
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQPRDFAGYAGHPPAMRWPNGAGLAVSIVVNVEEGAELSLSAGDERNEHIYEAVERVEG
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCC
QPDLCMESHFEYGPRAGWPRIRAALRSRKVPATLNACGRALEATPWIAREAVQDGHEIAA
CCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
HGWRWERHVHMDEQTERRAIARAVAAIERVSGRPPLGWHTRSATSLRTRDLLIEQGGFLY
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
DSNAYNDDIPYVVDTGHGPHVVLPYAFDTNDMRYYNNGGFVFAEDFARYCIAGFDRLLKE
ECCCCCCCCCEEEECCCCCEEEEEEEECCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHH
ADDAPRMLSIGLHTRIIGRPARIAGLEAFLDHALARENVWFASRADIAHAWRKAIGLPDW
CCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCC
QPRPCPETFATDSPT
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA