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The map label for this gene is potC [H]

Identifier: 110679661

GI number: 110679661

Start: 2301743

End: 2302561

Strand: Reverse

Name: potC [H]

Synonym: RD1_2412

Alternate gene names: 110679661

Gene position: 2302561-2301743 (Counterclockwise)

Preceding gene: 110679662

Following gene: 110679660

Centisome position: 55.71

GC content: 61.17

Gene sequence:

>819_bases
ATGATCAAAGCGCTGCGCACCTCTTCGCTCGGGGATATTCTGGGCATCGGTTTGGTCCTTTTCATCGCGGTGTTTTCGCT
GATCCTGCTGATCGCGCCGTCGATCATTGTTGTCATCATTTCTTTTGACACCCGCGCGTTCGTGAGCTTTCCGCCGGAAG
GCTTCACCCTGCGCTGGTACGCAGAGGTTTTTGAGCAGACCGAACTGGTCGGCGCCATGTGGACCAGCCTCAAGGTGGGT
CTGATGGTCACGGCACTGTGCATCGTGCTGGGTGTGCCCACTGCCCTCGCCTGTGTACGTGGCAAGTTTCGCGGCACCAC
GGCGCTTTCCGTCTTCGTGCTGGTGCCGCATATGGTGCCCGGCATCGTTCTCGGGGTGGCCGTGCTCTTTGCCGGAGCGC
TTGTGGGCGTCTCCCCCTCGATCTGGCTGCAGGCGGTCTCGATCGCCGTGTTCATCATGGCCGTCATGGTGCGCACGGTG
CAAAGCCGTCTTGTCCGGCTTGACCCCGCGCTGGAGGAAGCCGCGACGAACCTCGGTGCGTCATCCTTTCAGAGCCTGCG
CACTATCACATTCCCGCTGTTGCTGCCGGCGATATTGGCGGGGGCTGTGTTCACCTTCGTCGAGGGCTTTGACAACCTGT
CGGTCGCAATTTTCACCCATGGCTTCCGGGACAGACCCTTGCCCGTGGAGTTGCTGGCCCTCGTCCAATACACCTCCACC
CCCCTCGTGGCAGCGGTGTCCGGCGTTCAGATCCTGCTGGCAATCCTCGCGCTTGTCGCCGTGTCGATGAGCATCGGGCT
GGACAAGGTAAACGAATGA

Upstream 100 bases:

>100_bases
CCGTCAGTTCGCTGATCCTCATGGCCACCTGCCTGATCGTCCTCGTGATCATCGCGATGCTGACGAATATCTTTACCCGC
TGGACGAAAGGACGGGATGC

Downstream 100 bases:

>100_bases
TCCGCAGCAAACCGGCAGGATCTGAACGTCGGAACCATGCCACGATTGGGCGTGTTAGGGCGGCCGGAACCGGCATGAGC
CATCGTGAATCACCCGGACC

Product: ABC transporter permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIKALRTSSLGDILGIGLVLFIAVFSLILLIAPSIIVVIISFDTRAFVSFPPEGFTLRWYAEVFEQTELVGAMWTSLKVG
LMVTALCIVLGVPTALACVRGKFRGTTALSVFVLVPHMVPGIVLGVAVLFAGALVGVSPSIWLQAVSIAVFIMAVMVRTV
QSRLVRLDPALEEAATNLGASSFQSLRTITFPLLLPAILAGAVFTFVEGFDNLSVAIFTHGFRDRPLPVELLALVQYTST
PLVAAVSGVQILLAILALVAVSMSIGLDKVNE

Sequences:

>Translated_272_residues
MIKALRTSSLGDILGIGLVLFIAVFSLILLIAPSIIVVIISFDTRAFVSFPPEGFTLRWYAEVFEQTELVGAMWTSLKVG
LMVTALCIVLGVPTALACVRGKFRGTTALSVFVLVPHMVPGIVLGVAVLFAGALVGVSPSIWLQAVSIAVFIMAVMVRTV
QSRLVRLDPALEEAATNLGASSFQSLRTITFPLLLPAILAGAVFTFVEGFDNLSVAIFTHGFRDRPLPVELLALVQYTST
PLVAAVSGVQILLAILALVAVSMSIGLDKVNE
>Mature_272_residues
MIKALRTSSLGDILGIGLVLFIAVFSLILLIAPSIIVVIISFDTRAFVSFPPEGFTLRWYAEVFEQTELVGAMWTSLKVG
LMVTALCIVLGVPTALACVRGKFRGTTALSVFVLVPHMVPGIVLGVAVLFAGALVGVSPSIWLQAVSIAVFIMAVMVRTV
QSRLVRLDPALEEAATNLGASSFQSLRTITFPLLLPAILAGAVFTFVEGFDNLSVAIFTHGFRDRPLPVELLALVQYTST
PLVAAVSGVQILLAILALVAVSMSIGLDKVNE

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=231, Percent_Identity=32.034632034632, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787714, Length=206, Percent_Identity=36.4077669902913, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787081, Length=228, Percent_Identity=28.9473684210526, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28868; Mature: 28868

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKALRTSSLGDILGIGLVLFIAVFSLILLIAPSIIVVIISFDTRAFVSFPPEGFTLRWY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCEEHHH
AEVFEQTELVGAMWTSLKVGLMVTALCIVLGVPTALACVRGKFRGTTALSVFVLVPHMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GIVLGVAVLFAGALVGVSPSIWLQAVSIAVFIMAVMVRTVQSRLVRLDPALEEAATNLGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCH
SSFQSLRTITFPLLLPAILAGAVFTFVEGFDNLSVAIFTHGFRDRPLPVELLALVQYTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC
PLVAAVSGVQILLAILALVAVSMSIGLDKVNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIKALRTSSLGDILGIGLVLFIAVFSLILLIAPSIIVVIISFDTRAFVSFPPEGFTLRWY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCEEHHH
AEVFEQTELVGAMWTSLKVGLMVTALCIVLGVPTALACVRGKFRGTTALSVFVLVPHMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GIVLGVAVLFAGALVGVSPSIWLQAVSIAVFIMAVMVRTVQSRLVRLDPALEEAATNLGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCH
SSFQSLRTITFPLLLPAILAGAVFTFVEGFDNLSVAIFTHGFRDRPLPVELLALVQYTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCC
PLVAAVSGVQILLAILALVAVSMSIGLDKVNE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]