Click here to switch to the map view.

The map label for this gene is phnI [H]

Identifier: 110679641

GI number: 110679641

Start: 2281284

End: 2282372

Strand: Reverse

Name: phnI [H]

Synonym: RD1_2392

Alternate gene names: 110679641

Gene position: 2282372-2281284 (Counterclockwise)

Preceding gene: 110679642

Following gene: 110679640

Centisome position: 55.22

GC content: 61.62

Gene sequence:

>1089_bases
ATGTATGTAGCAGTCAAGGGCGGAGAGCGGGCAATCGAGAATGCCCACGCATGGCTCGCCGAAGAACGCCGCGGTGACAC
GGATATCGCGGAACTCAGCATCGCGCAGATCCGCGCGCAACTCAGTCTCGCCGTCAATCGCGTCATGGCCGAAGGGTCGC
TTTACGATCCGGACCTCGCGGCACTCGCGATCAAACAGGCGCGCGGCGATCTGATCGAAGCGATCTTCCTCATTCGCGCC
TATCGCACCACGCTGCCACGCTTTGGGGCGTCCGAGCCTGTGGATACCGGCGCCATGGCCTGTGATCGCCGCATCTCGGC
CACGTTCAAGGACTTGCCGGGTGGGCAGGTCTTGGGTCCGACCTTTGATTACACGCACCGTTTGCTCGATTTCAAACTGG
CCGCAGATGGTGAAGTGGCCAATGCGCCCTCCCGTGACGCCGAGCCGGGCAATGTCCCGCATGTCACCGAATTCCTGAAC
CGCGAAGGGCTGATCGAAGAGGCCCCCCATGACGACGCACCGCCCCCCGACCTGACCCGCGAACCGCTTGAGATGCCCGC
CAACCGCGCCCTGCGCCTGCAGGCGCTCACCCGCGCGGACGAAGGTTTTACCCTTGGCCTCGCCTACTCCACACAGCGCG
GCTATGGGCGCAACCATGCCTTTGTGGGCGAATTGCGGATCGGCTCCGTTCCCGTTGAGATGGAGATTCCCGAACTGGGA
TTTGCCGTTGAGATCGCAGAGGTGACCCTGACCGAATGTGAAACCGTCAACCAGTTCACCGGATCGAAGACCGAACCGCC
CCAATTCACACGTGGCTACGGGCTGGTTTTTGGCCAGACCGAGCGCAAGGCAATCTCCATGGCCTTGGTGGACCGCGCGC
TACGCTGGGAAGAACTGGGCGAGGATAACGTCGGTGCACCCGCACAGGACGCGGAATTCGTGCTCTATCACAGCGACAAT
ATTCAGGCGACGGGTTTTCTGGAGCATATCAAACTGCCCCACTACGTCGATTTTCAATCTGAACTGGAACTGGTGCGCAA
GCTGCGCCGCGAAGCGGGTGCGCAACAGATGCAGGAGGCAGCGGAATGA

Upstream 100 bases:

>100_bases
CTTGACTTCATTTTCACCTGTGGCGAATGCCTCGCGGCCTTGCCCCGCTCAACCGAAGTCTCGCGTTCAAGTGACGAAGC
GCACGCAGGAGCATCCTGAC

Downstream 100 bases:

>100_bases
CCGAGTATAACTTCGCCTACCTGGACGAACAAACCAAACGGATGATCCGCCGTGCGATCCTAAAGGGTCTGGCGATCCCC
GGCTATCAGGTCCCCTTCGC

Product: phosphonate metabolism protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MYVAVKGGERAIENAHAWLAEERRGDTDIAELSIAQIRAQLSLAVNRVMAEGSLYDPDLAALAIKQARGDLIEAIFLIRA
YRTTLPRFGASEPVDTGAMACDRRISATFKDLPGGQVLGPTFDYTHRLLDFKLAADGEVANAPSRDAEPGNVPHVTEFLN
REGLIEEAPHDDAPPPDLTREPLEMPANRALRLQALTRADEGFTLGLAYSTQRGYGRNHAFVGELRIGSVPVEMEIPELG
FAVEIAEVTLTECETVNQFTGSKTEPPQFTRGYGLVFGQTERKAISMALVDRALRWEELGEDNVGAPAQDAEFVLYHSDN
IQATGFLEHIKLPHYVDFQSELELVRKLRREAGAQQMQEAAE

Sequences:

>Translated_362_residues
MYVAVKGGERAIENAHAWLAEERRGDTDIAELSIAQIRAQLSLAVNRVMAEGSLYDPDLAALAIKQARGDLIEAIFLIRA
YRTTLPRFGASEPVDTGAMACDRRISATFKDLPGGQVLGPTFDYTHRLLDFKLAADGEVANAPSRDAEPGNVPHVTEFLN
REGLIEEAPHDDAPPPDLTREPLEMPANRALRLQALTRADEGFTLGLAYSTQRGYGRNHAFVGELRIGSVPVEMEIPELG
FAVEIAEVTLTECETVNQFTGSKTEPPQFTRGYGLVFGQTERKAISMALVDRALRWEELGEDNVGAPAQDAEFVLYHSDN
IQATGFLEHIKLPHYVDFQSELELVRKLRREAGAQQMQEAAE
>Mature_362_residues
MYVAVKGGERAIENAHAWLAEERRGDTDIAELSIAQIRAQLSLAVNRVMAEGSLYDPDLAALAIKQARGDLIEAIFLIRA
YRTTLPRFGASEPVDTGAMACDRRISATFKDLPGGQVLGPTFDYTHRLLDFKLAADGEVANAPSRDAEPGNVPHVTEFLN
REGLIEEAPHDDAPPPDLTREPLEMPANRALRLQALTRADEGFTLGLAYSTQRGYGRNHAFVGELRIGSVPVEMEIPELG
FAVEIAEVTLTECETVNQFTGSKTEPPQFTRGYGLVFGQTERKAISMALVDRALRWEELGEDNVGAPAQDAEFVLYHSDN
IQATGFLEHIKLPHYVDFQSELELVRKLRREAGAQQMQEAAE

Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]

COG id: COG3626

COG function: function code P; Uncharacterized enzyme of phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phnI family [H]

Homologues:

Organism=Escherichia coli, GI1790537, Length=351, Percent_Identity=60.1139601139601, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008773 [H]

Pfam domain/function: PF05861 PhnI [H]

EC number: NA

Molecular weight: Translated: 39900; Mature: 39900

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVAVKGGERAIENAHAWLAEERRGDTDIAELSIAQIRAQLSLAVNRVMAEGSLYDPDLA
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALAIKQARGDLIEAIFLIRAYRTTLPRFGASEPVDTGAMACDRRISATFKDLPGGQVLGP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECC
TFDYTHRLLDFKLAADGEVANAPSRDAEPGNVPHVTEFLNREGLIEEAPHDDAPPPDLTR
CHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
EPLEMPANRALRLQALTRADEGFTLGLAYSTQRGYGRNHAFVGELRIGSVPVEMEIPELG
CCHHCCCCHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCC
FAVEIAEVTLTECETVNQFTGSKTEPPQFTRGYGLVFGQTERKAISMALVDRALRWEELG
CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC
EDNVGAPAQDAEFVLYHSDNIQATGFLEHIKLPHYVDFQSELELVRKLRREAGAQQMQEA
CCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH
AE
CC
>Mature Secondary Structure
MYVAVKGGERAIENAHAWLAEERRGDTDIAELSIAQIRAQLSLAVNRVMAEGSLYDPDLA
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ALAIKQARGDLIEAIFLIRAYRTTLPRFGASEPVDTGAMACDRRISATFKDLPGGQVLGP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECC
TFDYTHRLLDFKLAADGEVANAPSRDAEPGNVPHVTEFLNREGLIEEAPHDDAPPPDLTR
CHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
EPLEMPANRALRLQALTRADEGFTLGLAYSTQRGYGRNHAFVGELRIGSVPVEMEIPELG
CCHHCCCCHHEEHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEEECCCCC
FAVEIAEVTLTECETVNQFTGSKTEPPQFTRGYGLVFGQTERKAISMALVDRALRWEELG
CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC
EDNVGAPAQDAEFVLYHSDNIQATGFLEHIKLPHYVDFQSELELVRKLRREAGAQQMQEA
CCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH
AE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]