| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is mtnK [H]
Identifier: 110679632
GI number: 110679632
Start: 2273277
End: 2274536
Strand: Direct
Name: mtnK [H]
Synonym: RD1_2383
Alternate gene names: 110679632
Gene position: 2273277-2274536 (Clockwise)
Preceding gene: 110679623
Following gene: 110679633
Centisome position: 55.0
GC content: 59.92
Gene sequence:
>1260_bases ATGAGTGCAAACACGGCGTATGAGGCTCTGAGCGTCGATACTCTGACGCAGCGGCTGAAAGATGTGCCTGCGCTTATCGA ACACGTCGGATCGGATGCTTCGGAATGGCACGTGCAGGAGGTCGGGGACGGCAATCTAAACCTCGTCTTCATCGTGAGTG GGTCGGTCGGCAAGATCATCGTCAAACAGGCGTTGCCCTATGTCCGCCTTGTGGGGGACAGCTGGCCCTTGCCGCTTTAC CGCGCGTTTTATGAGTATCACGCGCTGACCCGTCAGGCCGCACGCGATCCCGGCGCCGTCCCGGAGGTTTATCATTTTAA CGAAACGCAGGCGCTGATCGTGATGGAGTTCCTCGCGCCGCATGTGATCCTGCGCCGCAAGTTGATCGCCGGGGAAAAGG TTGCGGGGCTGGCGGATTTTCTGGGCCAGTTCTGCGCGCGGACGGCCTTTCGCGGGTCCGAGTTGTCGATGCCAAGCCCC GACAAGAAGGCGGATGTGGCGCTTTTTGCCGGTAACGTCGAAATCCCCGCAATCACCGAGGCGCTGGTTTTCACCGATCC CTATTTCGATGCGGAGATGAACAACCACACCGAGGGTCTTGCCCCGGTCATTGCCCAATTGCGCGGGGATGCGGCGCTGA AAATCAAGGTGCAGCAAATGCTGCAACGCTTTGTGTCCAATACGGAAACCATGGTGCACGGCGATCTGCATTCCGGCTCC ATCATGTCGACGGACAGCGACAGCAGGGTGATCGACCCCGAATTCGTGCAATATGGCCCGATGGGTTTTGACATCGGCAT GCTCTGTGCGAATTTCCTGATGGCCTATTTCAGCCAGCCTGCGCATCGCGGTGCGGATCTGTCCGAGTATCAGGAGTGGA TACTGGAAGTCATCGCAGACACCGCGCGCAGCTTTGAGGCAGAGTTCCGCCATCTGTGGGCCACCGAGCGGACGGGCATC CTGTACCCGGCGTCGCTGTTCGAGGATCAGGGCCAGGACAGCGCGGCGGCCTGCGATGCGGTTCTGGCCGGAATCTGGCG CGATGCATGGGCGGTCTGCGGGATCGAGATGCACCGGCGGTGTCTGTCCCTTGCGCATAACGCCGATTTCGAAGAGATCG CGGATGTCGCGATGCGTGCACGGCTTGAGGCGCGAAACCTCAGCATGGGCGCGGAATTGATCCATATGGCAGACACAATT GCGGATGCGCAGGCGGTTTGCGCGCTCGCGCGGAACTTTAACCGAAAGGACGTTCTATGA
Upstream 100 bases:
>100_bases CAGGGTGAAATACTTTTGTCAAACAGTTTGACATAAGTATAAACCGCCAAGTATGTCATTGAGGCAAAGCGCGCGTTGGA GCAAGAGAGGGAGGCCAGCG
Downstream 100 bases:
>100_bases AGATCGACGGCACGCACTACCGATCCTTGTGGTGGAACAGCGAAAACCACGTTCTGGAGATCATCGACCAACGCTGGTTG CCGCATGAATTTCGCGTCAT
Product: methylthioribose kinase
Products: NA
Alternate protein names: MTR kinase [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSANTAYEALSVDTLTQRLKDVPALIEHVGSDASEWHVQEVGDGNLNLVFIVSGSVGKIIVKQALPYVRLVGDSWPLPLY RAFYEYHALTRQAARDPGAVPEVYHFNETQALIVMEFLAPHVILRRKLIAGEKVAGLADFLGQFCARTAFRGSELSMPSP DKKADVALFAGNVEIPAITEALVFTDPYFDAEMNNHTEGLAPVIAQLRGDAALKIKVQQMLQRFVSNTETMVHGDLHSGS IMSTDSDSRVIDPEFVQYGPMGFDIGMLCANFLMAYFSQPAHRGADLSEYQEWILEVIADTARSFEAEFRHLWATERTGI LYPASLFEDQGQDSAAACDAVLAGIWRDAWAVCGIEMHRRCLSLAHNADFEEIADVAMRARLEARNLSMGAELIHMADTI ADAQAVCALARNFNRKDVL
Sequences:
>Translated_419_residues MSANTAYEALSVDTLTQRLKDVPALIEHVGSDASEWHVQEVGDGNLNLVFIVSGSVGKIIVKQALPYVRLVGDSWPLPLY RAFYEYHALTRQAARDPGAVPEVYHFNETQALIVMEFLAPHVILRRKLIAGEKVAGLADFLGQFCARTAFRGSELSMPSP DKKADVALFAGNVEIPAITEALVFTDPYFDAEMNNHTEGLAPVIAQLRGDAALKIKVQQMLQRFVSNTETMVHGDLHSGS IMSTDSDSRVIDPEFVQYGPMGFDIGMLCANFLMAYFSQPAHRGADLSEYQEWILEVIADTARSFEAEFRHLWATERTGI LYPASLFEDQGQDSAAACDAVLAGIWRDAWAVCGIEMHRRCLSLAHNADFEEIADVAMRARLEARNLSMGAELIHMADTI ADAQAVCALARNFNRKDVL >Mature_418_residues SANTAYEALSVDTLTQRLKDVPALIEHVGSDASEWHVQEVGDGNLNLVFIVSGSVGKIIVKQALPYVRLVGDSWPLPLYR AFYEYHALTRQAARDPGAVPEVYHFNETQALIVMEFLAPHVILRRKLIAGEKVAGLADFLGQFCARTAFRGSELSMPSPD KKADVALFAGNVEIPAITEALVFTDPYFDAEMNNHTEGLAPVIAQLRGDAALKIKVQQMLQRFVSNTETMVHGDLHSGSI MSTDSDSRVIDPEFVQYGPMGFDIGMLCANFLMAYFSQPAHRGADLSEYQEWILEVIADTARSFEAEFRHLWATERTGIL YPASLFEDQGQDSAAACDAVLAGIWRDAWAVCGIEMHRRCLSLAHNADFEEIADVAMRARLEARNLSMGAELIHMADTIA DAQAVCALARNFNRKDVL
Specific function: Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate [H]
COG id: COG4857
COG function: function code R; Predicted kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylthioribose kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR009212 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.100 [H]
Molecular weight: Translated: 46255; Mature: 46124
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANTAYEALSVDTLTQRLKDVPALIEHVGSDASEWHVQEVGDGNLNLVFIVSGSVGKII CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCHHHH VKQALPYVRLVGDSWPLPLYRAFYEYHALTRQAARDPGAVPEVYHFNETQALIVMEFLAP HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH HVILRRKLIAGEKVAGLADFLGQFCARTAFRGSELSMPSPDKKADVALFAGNVEIPAITE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHH ALVFTDPYFDAEMNNHTEGLAPVIAQLRGDAALKIKVQQMLQRFVSNTETMVHGDLHSGS HHHEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCCC IMSTDSDSRVIDPEFVQYGPMGFDIGMLCANFLMAYFSQPAHRGADLSEYQEWILEVIAD EECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TARSFEAEFRHLWATERTGILYPASLFEDQGQDSAAACDAVLAGIWRDAWAVCGIEMHRR HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLSLAHNADFEEIADVAMRARLEARNLSMGAELIHMADTIADAQAVCALARNFNRKDVL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SANTAYEALSVDTLTQRLKDVPALIEHVGSDASEWHVQEVGDGNLNLVFIVSGSVGKII CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCCCHHHH VKQALPYVRLVGDSWPLPLYRAFYEYHALTRQAARDPGAVPEVYHFNETQALIVMEFLAP HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH HVILRRKLIAGEKVAGLADFLGQFCARTAFRGSELSMPSPDKKADVALFAGNVEIPAITE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHH ALVFTDPYFDAEMNNHTEGLAPVIAQLRGDAALKIKVQQMLQRFVSNTETMVHGDLHSGS HHHEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCEEEECCCCCCC IMSTDSDSRVIDPEFVQYGPMGFDIGMLCANFLMAYFSQPAHRGADLSEYQEWILEVIAD EECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TARSFEAEFRHLWATERTGILYPASLFEDQGQDSAAACDAVLAGIWRDAWAVCGIEMHRR HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLSLAHNADFEEIADVAMRARLEARNLSMGAELIHMADTIADAQAVCALARNFNRKDVL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA