| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679595
Identifier: 110679595
GI number: 110679595
Start: 2238517
End: 2239008
Strand: Direct
Name: 110679595
Synonym: RD1_2340
Alternate gene names: NA
Gene position: 2238517-2239008 (Clockwise)
Preceding gene: 110679594
Following gene: 110679604
Centisome position: 54.16
GC content: 60.98
Gene sequence:
>492_bases ATGTCTGATTCCAAGGTGCGCATCCAAACGGTGGGTCCTGCTGATGTGCCGGATTTGATGGCGGCTTTGCAGGCACTGGC GCGCAATCTGGATGATCCCTTCAAGGTCACACCAGAGGATGTATCCAAGGCGCTTTTCGGCCCCGACAGCTTCACCATGG CCTTGCTGGCCCGGCAGGGCGGTAAAGTCTTTGGCGCGGTTTTTGCAGCCCCCTTGTTCACGACGCTGGGCGGCGGTGCC GTGCTATATGTGTCGGACCTTTGGGTCGATGCCTCGGTGCGCAAACAGTCGCTTGGAAGACGTTTGCTGGCCGCTGCCGC CGCCGAAGGGGCCAGCCGGTGGCAGACTTCGGGGATCAGGTTGACGGTCTATTCGGACAATGCGCCCGCACGCGCCTTTT ACGCGAAGCTTGGCTTCGTCGTGAACGAAAAGGACCTCACTGCGTTTCTGTCGGGTACGCGCGTTGCCGCATTGCAGGCG CGCGCGCAATAA
Upstream 100 bases:
>100_bases GCGGCTGGTTGCAAGATCAGAAGGTGTGTCGAAAGTCCGGACCACAGGGTTGCAACCGCTGCTGTGACACGCGACGTAGC GGGGTTGAAAGGGGTTGAAT
Downstream 100 bases:
>100_bases GTGTTGAGGCGCAGTTAGAGCGTCTGACGAAATACCTGAAACATCGCGTATCACGTAACGCGTTGAAATCTTTGATTTCA GGCAGCGTTATGTGAAGCAA
Product: acetyltransferase, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDSKVRIQTVGPADVPDLMAALQALARNLDDPFKVTPEDVSKALFGPDSFTMALLARQGGKVFGAVFAAPLFTTLGGGA VLYVSDLWVDASVRKQSLGRRLLAAAAAEGASRWQTSGIRLTVYSDNAPARAFYAKLGFVVNEKDLTAFLSGTRVAALQA RAQ
Sequences:
>Translated_163_residues MSDSKVRIQTVGPADVPDLMAALQALARNLDDPFKVTPEDVSKALFGPDSFTMALLARQGGKVFGAVFAAPLFTTLGGGA VLYVSDLWVDASVRKQSLGRRLLAAAAAEGASRWQTSGIRLTVYSDNAPARAFYAKLGFVVNEKDLTAFLSGTRVAALQA RAQ >Mature_162_residues SDSKVRIQTVGPADVPDLMAALQALARNLDDPFKVTPEDVSKALFGPDSFTMALLARQGGKVFGAVFAAPLFTTLGGGAV LYVSDLWVDASVRKQSLGRRLLAAAAAEGASRWQTSGIRLTVYSDNAPARAFYAKLGFVVNEKDLTAFLSGTRVAALQAR AQ
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17249; Mature: 17118
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKVRIQTVGPADVPDLMAALQALARNLDDPFKVTPEDVSKALFGPDSFTMALLARQG CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCC GKVFGAVFAAPLFTTLGGGAVLYVSDLWVDASVRKQSLGRRLLAAAAAEGASRWQTSGIR CHHHHHHHHHHHHHHCCCCEEEEEEEHEECHHHHHHHHHHHHHHHHHHHCHHHHCCCCEE LTVYSDNAPARAFYAKLGFVVNEKDLTAFLSGTRVAALQARAQ EEEEECCCCHHHHHHHHCEEECCCHHHHHHCCCEEEEEEECCC >Mature Secondary Structure SDSKVRIQTVGPADVPDLMAALQALARNLDDPFKVTPEDVSKALFGPDSFTMALLARQG CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCC GKVFGAVFAAPLFTTLGGGAVLYVSDLWVDASVRKQSLGRRLLAAAAAEGASRWQTSGIR CHHHHHHHHHHHHHHCCCCEEEEEEEHEECHHHHHHHHHHHHHHHHHHHCHHHHCCCCEE LTVYSDNAPARAFYAKLGFVVNEKDLTAFLSGTRVAALQARAQ EEEEECCCCHHHHHHHHCEEECCCHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA