| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is bglA [H]
Identifier: 110679576
GI number: 110679576
Start: 2213309
End: 2214622
Strand: Reverse
Name: bglA [H]
Synonym: RD1_2318
Alternate gene names: 110679576
Gene position: 2214622-2213309 (Counterclockwise)
Preceding gene: 110679577
Following gene: 110679575
Centisome position: 53.58
GC content: 60.2
Gene sequence:
>1314_bases ATGAAGTTTTCCCGCAGCAGCTTTCCGCCGGGCTTCCTGTTTGCCGCCGCAACCTCCAGCTATCAGATCGAAGGACATGG GTTCGGGGGCGCGGGGCCGACGCATTGGGACACCTTCGCCGCAACACCGGGCAATGTGGTGCGGGCAGAGCATGGGCAGA TCGCCTGCGATCACTATTCCCGCTGGGAGGAGGATCTCGATCTGATGCAGGCGATGGGCCTTGATGCCTATCGCTTTTCC ACCAGCTGGGCGCGGGTGCTGCCCGAGGGGCGTGGCACGGTCAATCAGGCGGGTCTGGATTTTTACGACCGCCTTGTTGA CGGCATGCTGGCGCGTGACCTGAAACCTATGGCGACGCTTTATCACTGGGAATTGCCCGCCGCGCTCGCGGATCTGGGCG GGTGGCGCAACCCCGACATTTCCCATTGGCTTGCCGATTTTGCCAGCATCGTGATGGAACGCATCGGCGATCGTGTCTTT AGTGCCGCCCCCATCAACGAGCCATGGTGCGTTGCGTGGCTATCCCATTTCATGGGACTGCAAGCACCGGGTCTGCGCGA TATTCGCGCCGCCGCCCATGCAATGCATCACGTGCTGACCGCGCATGGGCGCTGCATTCAGGCCATGCGCGCCCTTGGCA TGAACAACCTTGGCGCTGTGTGCAATTTTGAATATGTACACGCCGCAGATGACACGCACGAGGCGTCGGAGGCCGCGCGC CGCTATGAGGCGATTTACAACCGCTTTTTCGTGGGCGGGCTGTTTCACGGGACCTATCCGGACGAGGTGCTCGAAGGGCT CGGGGCCCATATGCCCAAAGGCTGGGAAGATGATTTTGACCTGATCGAGCAGAAACTCGACTGGTTCGGTGTCAACTATT ACACCTGCAAACGCATTGCGGCGGACAGCGGCCCATGGCCATCGCTGCGCGAGGTCGAAGGGCCGCTGCCGAAAACCCAG ATGGGTTGGGAGATAGAACCTGAAGGCCTTGAACATATCCTGACGTGGTTACAGCAAAACTACACCGGCGCACTGCCGCT TTACGTAACGGAAAACGGCATGGCCAATGCCGATGACACAACCACGCCTGATGACGCGCGCATGGACTATCTGGACGCAC ATCTTGCAGCCTCCCAACGCGCCATCGCGGCGGGCGTGCCCTTGGCGGGCTATACGTTCTGGTCCCTGATGGACAATTAC GAATGGTCGCTGGGCTATGAAAAACGCTTTGGTCTGGTGCATGTGGATTTTGACACGCTGCACCGCACGCCCAAGGCATC CTATCACGCGATAGCCCGCGCGCTGGCACGATAA
Upstream 100 bases:
>100_bases AAAACACCCGGCACCGAACTGCCCTGCGAACTGTGGGAAGCTGAATTTGTCCAGGGTGCTTCCACTGGCCCCGGTCCTTA CGCATAAAGGTATCCCCATC
Downstream 100 bases:
>100_bases AGTGTCATGCGAAAAACCTCGCGCACGTAACGCCGCCTGAAACTCAGGGTTTCAACGCGCTACGTGTTTCAGGTATTTCG TCAGACGCTCTAAGGCACGA
Product: beta-glucosidase A
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKFSRSSFPPGFLFAAATSSYQIEGHGFGGAGPTHWDTFAATPGNVVRAEHGQIACDHYSRWEEDLDLMQAMGLDAYRFS TSWARVLPEGRGTVNQAGLDFYDRLVDGMLARDLKPMATLYHWELPAALADLGGWRNPDISHWLADFASIVMERIGDRVF SAAPINEPWCVAWLSHFMGLQAPGLRDIRAAAHAMHHVLTAHGRCIQAMRALGMNNLGAVCNFEYVHAADDTHEASEAAR RYEAIYNRFFVGGLFHGTYPDEVLEGLGAHMPKGWEDDFDLIEQKLDWFGVNYYTCKRIAADSGPWPSLREVEGPLPKTQ MGWEIEPEGLEHILTWLQQNYTGALPLYVTENGMANADDTTTPDDARMDYLDAHLAASQRAIAAGVPLAGYTFWSLMDNY EWSLGYEKRFGLVHVDFDTLHRTPKASYHAIARALAR
Sequences:
>Translated_437_residues MKFSRSSFPPGFLFAAATSSYQIEGHGFGGAGPTHWDTFAATPGNVVRAEHGQIACDHYSRWEEDLDLMQAMGLDAYRFS TSWARVLPEGRGTVNQAGLDFYDRLVDGMLARDLKPMATLYHWELPAALADLGGWRNPDISHWLADFASIVMERIGDRVF SAAPINEPWCVAWLSHFMGLQAPGLRDIRAAAHAMHHVLTAHGRCIQAMRALGMNNLGAVCNFEYVHAADDTHEASEAAR RYEAIYNRFFVGGLFHGTYPDEVLEGLGAHMPKGWEDDFDLIEQKLDWFGVNYYTCKRIAADSGPWPSLREVEGPLPKTQ MGWEIEPEGLEHILTWLQQNYTGALPLYVTENGMANADDTTTPDDARMDYLDAHLAASQRAIAAGVPLAGYTFWSLMDNY EWSLGYEKRFGLVHVDFDTLHRTPKASYHAIARALAR >Mature_437_residues MKFSRSSFPPGFLFAAATSSYQIEGHGFGGAGPTHWDTFAATPGNVVRAEHGQIACDHYSRWEEDLDLMQAMGLDAYRFS TSWARVLPEGRGTVNQAGLDFYDRLVDGMLARDLKPMATLYHWELPAALADLGGWRNPDISHWLADFASIVMERIGDRVF SAAPINEPWCVAWLSHFMGLQAPGLRDIRAAAHAMHHVLTAHGRCIQAMRALGMNNLGAVCNFEYVHAADDTHEASEAAR RYEAIYNRFFVGGLFHGTYPDEVLEGLGAHMPKGWEDDFDLIEQKLDWFGVNYYTCKRIAADSGPWPSLREVEGPLPKTQ MGWEIEPEGLEHILTWLQQNYTGALPLYVTENGMANADDTTTPDDARMDYLDAHLAASQRAIAAGVPLAGYTFWSLMDNY EWSLGYEKRFGLVHVDFDTLHRTPKASYHAIARALAR
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI32481206, Length=471, Percent_Identity=33.7579617834395, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI13273313, Length=451, Percent_Identity=32.5942350332594, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI110681710, Length=469, Percent_Identity=30.2771855010661, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI24497614, Length=452, Percent_Identity=29.646017699115, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI28376633, Length=440, Percent_Identity=28.4090909090909, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI190360571, Length=98, Percent_Identity=45.9183673469388, Blast_Score=87, Evalue=4e-17, Organism=Escherichia coli, GI2367174, Length=484, Percent_Identity=28.3057851239669, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI2367270, Length=463, Percent_Identity=30.0215982721382, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1789070, Length=403, Percent_Identity=29.7766749379653, Blast_Score=141, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17552856, Length=455, Percent_Identity=29.010989010989, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17539390, Length=466, Percent_Identity=27.6824034334764, Blast_Score=184, Evalue=9e-47, Organism=Drosophila melanogaster, GI21356577, Length=466, Percent_Identity=33.0472103004292, Blast_Score=232, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 48863; Mature: 48863
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSRSSFPPGFLFAAATSSYQIEGHGFGGAGPTHWDTFAATPGNVVRAEHGQIACDHYS CCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEECHHHH RWEEDLDLMQAMGLDAYRFSTSWARVLPEGRGTVNQAGLDFYDRLVDGMLARDLKPMATL HHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH YHWELPAALADLGGWRNPDISHWLADFASIVMERIGDRVFSAAPINEPWCVAWLSHFMGL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC QAPGLRDIRAAAHAMHHVLTAHGRCIQAMRALGMNNLGAVCNFEYVHAADDTHEASEAAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH RYEAIYNRFFVGGLFHGTYPDEVLEGLGAHMPKGWEDDFDLIEQKLDWFGVNYYTCKRIA HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ADSGPWPSLREVEGPLPKTQMGWEIEPEGLEHILTWLQQNYTGALPLYVTENGMANADDT CCCCCCCCHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC TTPDDARMDYLDAHLAASQRAIAAGVPLAGYTFWSLMDNYEWSLGYEKRFGLVHVDFDTL CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHH HRTPKASYHAIARALAR HCCCCHHHHHHHHHHCC >Mature Secondary Structure MKFSRSSFPPGFLFAAATSSYQIEGHGFGGAGPTHWDTFAATPGNVVRAEHGQIACDHYS CCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEECHHHH RWEEDLDLMQAMGLDAYRFSTSWARVLPEGRGTVNQAGLDFYDRLVDGMLARDLKPMATL HHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH YHWELPAALADLGGWRNPDISHWLADFASIVMERIGDRVFSAAPINEPWCVAWLSHFMGL HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC QAPGLRDIRAAAHAMHHVLTAHGRCIQAMRALGMNNLGAVCNFEYVHAADDTHEASEAAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHH RYEAIYNRFFVGGLFHGTYPDEVLEGLGAHMPKGWEDDFDLIEQKLDWFGVNYYTCKRIA HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ADSGPWPSLREVEGPLPKTQMGWEIEPEGLEHILTWLQQNYTGALPLYVTENGMANADDT CCCCCCCCHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC TTPDDARMDYLDAHLAASQRAIAAGVPLAGYTFWSLMDNYEWSLGYEKRFGLVHVDFDTL CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHH HRTPKASYHAIARALAR HCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]