| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679486
Identifier: 110679486
GI number: 110679486
Start: 2116912
End: 2117511
Strand: Direct
Name: 110679486
Synonym: RD1_2215
Alternate gene names: NA
Gene position: 2116912-2117511 (Clockwise)
Preceding gene: 110679485
Following gene: 110679488
Centisome position: 51.22
GC content: 56.5
Gene sequence:
>600_bases TTGTTTCTTGGTTTGGCCGTTGGCGTGGCACTTGCGGTGAGCACTGTGCCTGTCGCCGCTGCCGGAAATGTTGGCAGCGC GTTTCTTGTGGCGCAAAAGCCGGCAAAGGCACCGTCCGGGTTTATCGGGCTGTGTGCGCGCTACGATTGGGTTTGTTCTG CAACAAAAGCGCGCGGCAACGTAACCGCCGAGCATATTTCATTGGCAAAAACCATCAATCGAACGGTCAACCGCCAGGTC AAGGAAATCGAGGATCTGCGCCAATATGGCAAGGAAGAGCACTGGGCGCTGCCCTCTGCGCGCGGCGGAGACTGCGAAGA TCTCGTGTTGTTGAAAAAGAAAATGCTGGTGGAGCGTGGTGTTCCTTCGGACGCACTTTTGATCGCCACCGTTCTGGACC GCAAACTCAACAGTCACGCGGTTCTGGTTATGCGCACAAAGGCGGGTGATCTCGTGCTCGACAATCTGACAAACAAGATC AAGCCATGGAAAGAAACGGGCTACACGTTCCTGAAGCTTCAAAACCCCAAGTCGCTGAACCGGTGGGATGCCGTGCTGGC CGGCGGTGTCATTTCTGACCGGCCTACTGCGTCGCGCTGA
Upstream 100 bases:
>100_bases TCAGCAGAACCGTTCGGAAAAAGCAAATGCAACTCTGGCTGCGCGTCCGACCCCTTTCATCTCACGGCTTTTTCCCCAAC CGCAAAACCCTGTGAAAGGG
Downstream 100 bases:
>100_bases CAGTAGTTTTGCCATCGTGTGACGAAAAAAGCGCAGACAATCGAACGTTTGTCTGCGCCTTCCGGAGTTGTGATAGCGTC GTGCGGTTTTTTAAAGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Transglutaminase-Like Cysteine Peptidase; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MFLGLAVGVALAVSTVPVAAAGNVGSAFLVAQKPAKAPSGFIGLCARYDWVCSATKARGNVTAEHISLAKTINRTVNRQV KEIEDLRQYGKEEHWALPSARGGDCEDLVLLKKKMLVERGVPSDALLIATVLDRKLNSHAVLVMRTKAGDLVLDNLTNKI KPWKETGYTFLKLQNPKSLNRWDAVLAGGVISDRPTASR
Sequences:
>Translated_199_residues MFLGLAVGVALAVSTVPVAAAGNVGSAFLVAQKPAKAPSGFIGLCARYDWVCSATKARGNVTAEHISLAKTINRTVNRQV KEIEDLRQYGKEEHWALPSARGGDCEDLVLLKKKMLVERGVPSDALLIATVLDRKLNSHAVLVMRTKAGDLVLDNLTNKI KPWKETGYTFLKLQNPKSLNRWDAVLAGGVISDRPTASR >Mature_199_residues MFLGLAVGVALAVSTVPVAAAGNVGSAFLVAQKPAKAPSGFIGLCARYDWVCSATKARGNVTAEHISLAKTINRTVNRQV KEIEDLRQYGKEEHWALPSARGGDCEDLVLLKKKMLVERGVPSDALLIATVLDRKLNSHAVLVMRTKAGDLVLDNLTNKI KPWKETGYTFLKLQNPKSLNRWDAVLAGGVISDRPTASR
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21503; Mature: 21503
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLGLAVGVALAVSTVPVAAAGNVGSAFLVAQKPAKAPSGFIGLCARYDWVCSATKARGN CCHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC VTAEHISLAKTINRTVNRQVKEIEDLRQYGKEEHWALPSARGGDCEDLVLLKKKMLVERG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC VPSDALLIATVLDRKLNSHAVLVMRTKAGDLVLDNLTNKIKPWKETGYTFLKLQNPKSLN CCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHCCCHHHCCEEEEEECCCCCCC RWDAVLAGGVISDRPTASR HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFLGLAVGVALAVSTVPVAAAGNVGSAFLVAQKPAKAPSGFIGLCARYDWVCSATKARGN CCHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC VTAEHISLAKTINRTVNRQVKEIEDLRQYGKEEHWALPSARGGDCEDLVLLKKKMLVERG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC VPSDALLIATVLDRKLNSHAVLVMRTKAGDLVLDNLTNKIKPWKETGYTFLKLQNPKSLN CCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHCCCHHHCCEEEEEECCCCCCC RWDAVLAGGVISDRPTASR HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA