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The map label for this gene is yggC [H]

Identifier: 110679481

GI number: 110679481

Start: 2111702

End: 2112328

Strand: Reverse

Name: yggC [H]

Synonym: RD1_2210

Alternate gene names: 110679481

Gene position: 2112328-2111702 (Counterclockwise)

Preceding gene: 110679482

Following gene: 110679478

Centisome position: 51.11

GC content: 62.84

Gene sequence:

>627_bases
ATGCAGCTTGACTGGGATCTAGAGGCGCTGGCCGCACGGATCACGGCGCTGCCCTTTCGCAACAAAAGGCGGCTGATTGC
CTTGGCTGGCCCGCCCGCAAGTGGGAAATCAACGCTCGCCGAGGCCTTGGCCGAACGCGTCCCCAACAGCTGCGCGCTGC
CGATGGACGGGTTTCACCTTGACAACCGCATCCTGCGCGAACGCGGGTTGAGTGCGCGCAAGGGTGCGCCCGAGACCTTC
GACGTGGCCGGATTGGCGCATCTGCTGCGCCGCCTGCTGCGGGAGGACAGCGTGGTTTACCCGCTCTTTGACCGCCATCT
GGATTGCGCCGTGGCTGGCGCAGGCATCGCCGAGGCGAGTGCGACGACCGTTATTGTCGAGGGCAACTATCTGCTGCTCG
ACGCCCCGGAGTGGCGCGATCTGCGCCCTCTTTGGGATTTCGCGGTTTATGTGTCCGTCTCCTCCGACGTACTGCGCGCT
CGCCTGTTGAAACGCTGGCACGATCACGGGTTCGCGGATGCAGATGCGCAGGCAAAGGTTGCGCAAAACGACATGCCCAA
CGCGCAAACCATATGTAACGCATTGCTGACCCCTGATTGCACCCTGCACCAAAAATCAACGCCCTAA

Upstream 100 bases:

>100_bases
CACCGTCTGGGCAAACGCCTCTGTGTTGTCGACCCCAAGGATCACTCCATGTCCGACGCCGTGGCCTATATGACCGGGGC
CACCGTGCCGGATGGGGCGC

Downstream 100 bases:

>100_bases
AGCGACATGCGAAAAACCGCAATCACGTAACGCCGCCTGAAAACAAAGGTTTCAACACGTTACGTGCTTCTTGATGTTTC
AGGTATTTCGTCAGACGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MQLDWDLEALAARITALPFRNKRRLIALAGPPASGKSTLAEALAERVPNSCALPMDGFHLDNRILRERGLSARKGAPETF
DVAGLAHLLRRLLREDSVVYPLFDRHLDCAVAGAGIAEASATTVIVEGNYLLLDAPEWRDLRPLWDFAVYVSVSSDVLRA
RLLKRWHDHGFADADAQAKVAQNDMPNAQTICNALLTPDCTLHQKSTP

Sequences:

>Translated_208_residues
MQLDWDLEALAARITALPFRNKRRLIALAGPPASGKSTLAEALAERVPNSCALPMDGFHLDNRILRERGLSARKGAPETF
DVAGLAHLLRRLLREDSVVYPLFDRHLDCAVAGAGIAEASATTVIVEGNYLLLDAPEWRDLRPLWDFAVYVSVSSDVLRA
RLLKRWHDHGFADADAQAKVAQNDMPNAQTICNALLTPDCTLHQKSTP
>Mature_208_residues
MQLDWDLEALAARITALPFRNKRRLIALAGPPASGKSTLAEALAERVPNSCALPMDGFHLDNRILRERGLSARKGAPETF
DVAGLAHLLRRLLREDSVVYPLFDRHLDCAVAGAGIAEASATTVIVEGNYLLLDAPEWRDLRPLWDFAVYVSVSSDVLRA
RLLKRWHDHGFADADAQAKVAQNDMPNAQTICNALLTPDCTLHQKSTP

Specific function: Unknown

COG id: COG1072

COG function: function code H; Panthothenate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789296, Length=191, Percent_Identity=40.3141361256544, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004566 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22886; Mature: 22886

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDWDLEALAARITALPFRNKRRLIALAGPPASGKSTLAEALAERVPNSCALPMDGFHL
CCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH
DNRILRERGLSARKGAPETFDVAGLAHLLRRLLREDSVVYPLFDRHLDCAVAGAGIAEAS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHCCCCCCCC
ATTVIVEGNYLLLDAPEWRDLRPLWDFAVYVSVSSDVLRARLLKRWHDHGFADADAQAKV
CEEEEEECCEEEEECCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHH
AQNDMPNAQTICNALLTPDCTLHQKSTP
HHCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQLDWDLEALAARITALPFRNKRRLIALAGPPASGKSTLAEALAERVPNSCALPMDGFHL
CCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH
DNRILRERGLSARKGAPETFDVAGLAHLLRRLLREDSVVYPLFDRHLDCAVAGAGIAEAS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHCCHHHHHHCCCCCCCC
ATTVIVEGNYLLLDAPEWRDLRPLWDFAVYVSVSSDVLRARLLKRWHDHGFADADAQAKV
CEEEEEECCEEEEECCCCCCCCHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHH
AQNDMPNAQTICNALLTPDCTLHQKSTP
HHCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2546007; 9278503 [H]