| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is panE
Identifier: 110679471
GI number: 110679471
Start: 2095945
End: 2096922
Strand: Reverse
Name: panE
Synonym: RD1_2198
Alternate gene names: NA
Gene position: 2096922-2095945 (Counterclockwise)
Preceding gene: 110679472
Following gene: 110679470
Centisome position: 50.73
GC content: 61.76
Gene sequence:
>978_bases ATGAAGATTTGCATATTCGGAGCGGGCGCCATAGGCGGCTATATGGGCGTAAAACTCGCACAGGCTGGCGCGGACGTCAG TCTCGTCGCGCGGGGCCCACACCTTGCGGCCATGCAGGAAAAGGGCCTGACGCTGATCGAGGAAAGCGGCGAAAGCACCG TCAAGGTCACCGCCTCTGACAACCCGTCGGACCTTGGGCCGCAGGATTACGTGATCGTCACGCTCAAGGCCCATTCTGTC CCGCCTGTGGTGGATAAAATGCAGCCGCTGATCGGTGAGAACACGACCATCGTCAGCGGCGTGAACGGCGTGCCGTGGTG GTATTTCCACAAAATCGGCGGCCCACTGGAAGGCACACGACTCAGCACCGTGGACCCGGGCAATGCACAATGGGACGGGT TCGGTCCGGACCGCGTGCTCGGCTGCGTGGTCTATCCCGCCGCCGAAGTGTCCGAACCCGGCACGATCAAGCACATCGAG GGCAACCGCTTTTCCCTCGGCGAACCGGATGGATCAAAGTCCGACCGCGCCTTGGCCTTGTCAAAAGCGCTCGCATCTGC AGGGCTGAAGGCCCCCGTGCGCCCCCGCCTGCGCGACGAAATCTGGGTCAAGCTATGGGGCAACCTGTCTTTCAACCCGA TTTCTGCGCTCACCCATGCAACGCTGGATGTGTTGTGCACAGATCCCGGCACCCGTGCCGTTGCGCGCGGCATGATGGTC GAAGCGCAGGAAATCGCAGAAAAACTTGGCGTGAAATTCCCGATTGATGTGGATCGTCGCATCGACGGGGGGGCGGCTGT GGGCGCGCATCGCACATCTATGCTGCAAGACCTCGATGCTGGTCGCCCGATGGAAATCGATGCCCTGCTCGGCTCGGTAC ATGAATTGGGCAAGGTGACGCAGACGCCGACGCCCACGATTGATACGGTGCTTGCGCTGACCAAATTGCGCGCGAAAACG GCCGGGCTCTACGCCTGA
Upstream 100 bases:
>100_bases AATGCGCTGATCAGCTTTGCAAAGTTGATCAGCGCAGTTAAGCCCCTGTTATAGCTGCAATACCACCAGCGCGGCTCAGG GGATTTGAAGGAAAAACACC
Downstream 100 bases:
>100_bases GGGAGGGTCGCTATGTCCATCAAGAACATTCTTGTCGCCTATAACGGCCTGCCCGGATCCGGTGCGGCCCTGCACGGCGC GGTCACGATGCAGAAGTTTT
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKICIFGAGAIGGYMGVKLAQAGADVSLVARGPHLAAMQEKGLTLIEESGESTVKVTASDNPSDLGPQDYVIVTLKAHSV PPVVDKMQPLIGENTTIVSGVNGVPWWYFHKIGGPLEGTRLSTVDPGNAQWDGFGPDRVLGCVVYPAAEVSEPGTIKHIE GNRFSLGEPDGSKSDRALALSKALASAGLKAPVRPRLRDEIWVKLWGNLSFNPISALTHATLDVLCTDPGTRAVARGMMV EAQEIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQDLDAGRPMEIDALLGSVHELGKVTQTPTPTIDTVLALTKLRAKT AGLYA
Sequences:
>Translated_325_residues MKICIFGAGAIGGYMGVKLAQAGADVSLVARGPHLAAMQEKGLTLIEESGESTVKVTASDNPSDLGPQDYVIVTLKAHSV PPVVDKMQPLIGENTTIVSGVNGVPWWYFHKIGGPLEGTRLSTVDPGNAQWDGFGPDRVLGCVVYPAAEVSEPGTIKHIE GNRFSLGEPDGSKSDRALALSKALASAGLKAPVRPRLRDEIWVKLWGNLSFNPISALTHATLDVLCTDPGTRAVARGMMV EAQEIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQDLDAGRPMEIDALLGSVHELGKVTQTPTPTIDTVLALTKLRAKT AGLYA >Mature_325_residues MKICIFGAGAIGGYMGVKLAQAGADVSLVARGPHLAAMQEKGLTLIEESGESTVKVTASDNPSDLGPQDYVIVTLKAHSV PPVVDKMQPLIGENTTIVSGVNGVPWWYFHKIGGPLEGTRLSTVDPGNAQWDGFGPDRVLGCVVYPAAEVSEPGTIKHIE GNRFSLGEPDGSKSDRALALSKALASAGLKAPVRPRLRDEIWVKLWGNLSFNPISALTHATLDVLCTDPGTRAVARGMMV EAQEIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQDLDAGRPMEIDALLGSVHELGKVTQTPTPTIDTVLALTKLRAKT AGLYA
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 34301; Mature: 34301
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKICIFGAGAIGGYMGVKLAQAGADVSLVARGPHLAAMQEKGLTLIEESGESTVKVTASD CEEEEEECCHHHHHHHHEEECCCCCEEEEECCCCHHHHHHCCCEEEECCCCCEEEEEECC NPSDLGPQDYVIVTLKAHSVPPVVDKMQPLIGENTTIVSGVNGVPWWYFHKIGGPLEGTR CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCE LSTVDPGNAQWDGFGPDRVLGCVVYPAAEVSEPGTIKHIEGNRFSLGEPDGSKSDRALAL EEEECCCCCCCCCCCHHHEEEEEEECCHHCCCCCCEEEECCCEEECCCCCCCCCCHHHHH SKALASAGLKAPVRPRLRDEIWVKLWGNLSFNPISALTHATLDVLCTDPGTRAVARGMMV HHHHHHCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHCEEEEEECCCCHHHHHHHHHH EAQEIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQDLDAGRPMEIDALLGSVHELGKVT HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC QTPTPTIDTVLALTKLRAKTAGLYA CCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKICIFGAGAIGGYMGVKLAQAGADVSLVARGPHLAAMQEKGLTLIEESGESTVKVTASD CEEEEEECCHHHHHHHHEEECCCCCEEEEECCCCHHHHHHCCCEEEECCCCCEEEEEECC NPSDLGPQDYVIVTLKAHSVPPVVDKMQPLIGENTTIVSGVNGVPWWYFHKIGGPLEGTR CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCE LSTVDPGNAQWDGFGPDRVLGCVVYPAAEVSEPGTIKHIEGNRFSLGEPDGSKSDRALAL EEEECCCCCCCCCCCHHHEEEEEEECCHHCCCCCCEEEECCCEEECCCCCCCCCCHHHHH SKALASAGLKAPVRPRLRDEIWVKLWGNLSFNPISALTHATLDVLCTDPGTRAVARGMMV HHHHHHCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHCEEEEEECCCCHHHHHHHHHH EAQEIAEKLGVKFPIDVDRRIDGGAAVGAHRTSMLQDLDAGRPMEIDALLGSVHELGKVT HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCC QTPTPTIDTVLALTKLRAKTAGLYA CCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]