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The map label for this gene is 110679460

Identifier: 110679460

GI number: 110679460

Start: 2083777

End: 2084298

Strand: Direct

Name: 110679460

Synonym: RD1_2186

Alternate gene names: NA

Gene position: 2083777-2084298 (Clockwise)

Preceding gene: 110679459

Following gene: 110679461

Centisome position: 50.42

GC content: 58.24

Gene sequence:

>522_bases
ATGGGCTGCCCGCGTCCATGTAATATGTCAGTCATTTCCAGAATATCACGGGCGCTGTGCGCCATTGGTGCGGTCCTGAT
GGCCGCCACCGGGGCCATGCTGACCTATGAGGTGATCGCCAGATACTTCTTTATCAAACCGACGATCTGGGCCGCTGAAC
TCAGTCAGCTGTGCCTGATCTGGGGGTGTTTTCTCGCACTGCCGCATCTTTTGGTGTTGCGTCGCCACATCACGGTGAAC
GCTGTTACCAACCTGCTGCCTGAGCGTGCGCAGAAGGTTTGCGCCGCTTTTGCGCTTGTCGCGATTATCGTGTTTTCATC
CATCGTTGCGTTTTACGGCTGGCACATATTCTACGACAGCTTTTCGCGCGGGCGCACCACCGGGTCGCTGCTGAACCTGC
CGGTCTGGATCGCGGAACTGTCTGTGCCCGTGGGGTTTGGCATGCTCGCCTTGCAGGGTCTTGTTGAGTTGATCCGACTG
CCCGGCGCGGGCACCACAAGCCTTGGAGCGACACACGAATGA

Upstream 100 bases:

>100_bases
TATCTTGAGGCCACGGGTGAAGCAGGTCAGAAAATTCTTGATGCTTTGGGTGCAGGAGGCTCCTGAAGTATCTGTAATAT
AGAAGGAAAGCGGGTGGCTG

Downstream 100 bases:

>100_bases
CCATTCTGCTTATTCTGGGCTCCCTTTTCGGGCTGTTGCTGGTCGGGGTGCCGGTGGCCTTTGCGCTGGGGGGCATGGGG
CTTGGCATGTTGTTGCTGGG

Product: TRAP transporter, DctQ-like subunit, putative

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Integral Membrane Protein; TRAP Transporter DctQ-Like Subunit; TRAP-Type C4-Dicarboxylate Transport System Small Permease

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MGCPRPCNMSVISRISRALCAIGAVLMAATGAMLTYEVIARYFFIKPTIWAAELSQLCLIWGCFLALPHLLVLRRHITVN
AVTNLLPERAQKVCAAFALVAIIVFSSIVAFYGWHIFYDSFSRGRTTGSLLNLPVWIAELSVPVGFGMLALQGLVELIRL
PGAGTTSLGATHE

Sequences:

>Translated_173_residues
MGCPRPCNMSVISRISRALCAIGAVLMAATGAMLTYEVIARYFFIKPTIWAAELSQLCLIWGCFLALPHLLVLRRHITVN
AVTNLLPERAQKVCAAFALVAIIVFSSIVAFYGWHIFYDSFSRGRTTGSLLNLPVWIAELSVPVGFGMLALQGLVELIRL
PGAGTTSLGATHE
>Mature_172_residues
GCPRPCNMSVISRISRALCAIGAVLMAATGAMLTYEVIARYFFIKPTIWAAELSQLCLIWGCFLALPHLLVLRRHITVNA
VTNLLPERAQKVCAAFALVAIIVFSSIVAFYGWHIFYDSFSRGRTTGSLLNLPVWIAELSVPVGFGMLALQGLVELIRLP
GAGTTSLGATHE

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18781; Mature: 18649

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCPRPCNMSVISRISRALCAIGAVLMAATGAMLTYEVIARYFFIKPTIWAAELSQLCLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGCFLALPHLLVLRRHITVNAVTNLLPERAQKVCAAFALVAIIVFSSIVAFYGWHIFYDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSRGRTTGSLLNLPVWIAELSVPVGFGMLALQGLVELIRLPGAGTTSLGATHE
HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GCPRPCNMSVISRISRALCAIGAVLMAATGAMLTYEVIARYFFIKPTIWAAELSQLCLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGCFLALPHLLVLRRHITVNAVTNLLPERAQKVCAAFALVAIIVFSSIVAFYGWHIFYDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSRGRTTGSLLNLPVWIAELSVPVGFGMLALQGLVELIRLPGAGTTSLGATHE
HHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA