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The map label for this gene is dctP [H]

Identifier: 110679459

GI number: 110679459

Start: 2082753

End: 2083742

Strand: Direct

Name: dctP [H]

Synonym: RD1_2185

Alternate gene names: 110679459

Gene position: 2082753-2083742 (Clockwise)

Preceding gene: 110679458

Following gene: 110679460

Centisome position: 50.39

GC content: 58.89

Gene sequence:

>990_bases
ATGTTCAGAAATGCAATCCTGGGCGCTGTTGCGCTGACTGCGCTCAGCGGTGCCGCCATTGCGCAGGAGAAAATGCGCAT
CTCGTTGCAACTGCCCCTGACCAGCCACCTCGGAGAGAACCTCGTTCTGTTCGAAAAAGAGGTTGAGGAACGCACGGGCG
GTGCCATCGACGTCGAAATCTACGACAGTGCGACGCTTTACAAGGACAAGGAAGTCCCCGCTGCGGTCGGGTCGGGTGCC
ATCGAAGCCGGTGTCGCATCCCTGACGCGCTATGTGGGCGATGCGCCTGTTGTTGACGTGTTCTACATGCCGTTCCTGTT
CAACACCGAGGAAAAGGTGCGCGCCGCCGTGGCCGAAGGGTCGCCCGTGCGCACTGTGCTTGAAGAGGAAATCGCCAAGA
CCGGCGGTCAGGTTCTCTATTGGCAGGCCTATGGCGGTGCGATTTTGCTCTCACAAGGAGGCCCGATCCGCACACCGGAA
GACATGAAGGGCAAAAAGGCGCGGGTTTTCGGTAAAACCCTCGGTGACTTTGTCACCGCAGCGGGCGGGGCACCGACGCT
GATCTCCGGTTCGGAGCAATATCTGGCCTATCAGCGGGGGACGGTGGATGTTGGTATGACCGGGGTATCCGGCGTCAAAT
CCCGCAAGCTCTGGGAGGTCATGGATACGATCACCAAAACCAACCACGCCAATATCGAATTTGTGGTTGTCGTGAACAGC
GACTGGTGGGCCGGTCTGTCACCCGAGTTGCAAGGCCATATCAAGGCGGCAGCACAGGTCGCACAAGATGACGTGCGCGA
CCGCATGAGTGGGATCGAAGCGGCAGCCTACAAAGCCGCCGAAGAGAACGGAATGACCATCGTCGAACTCAGCGATGCAG
AACTGTCCGCATGGCAGGAGGTCGCACAGCCCGTCTATGACGCCTATCTTGAGGCCACGGGTGAAGCAGGTCAGAAAATT
CTTGATGCTTTGGGTGCAGGAGGCTCCTGA

Upstream 100 bases:

>100_bases
GCTGCTGGGAGGAAGCGGTCCCGGCGAATAAACAGTTGCAAGTTCTGCAAGCGCCGTTAACGTCGCAACTCCAAAAAGAA
GAATTCACGGGAGGAACCAC

Downstream 100 bases:

>100_bases
AGTATCTGTAATATAGAAGGAAAGCGGGTGGCTGATGGGCTGCCCGCGTCCATGTAATATGTCAGTCATTTCCAGAATAT
CACGGGCGCTGTGCGCCATT

Product: C4-dicarboxylate-binding periplasmic protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MFRNAILGAVALTALSGAAIAQEKMRISLQLPLTSHLGENLVLFEKEVEERTGGAIDVEIYDSATLYKDKEVPAAVGSGA
IEAGVASLTRYVGDAPVVDVFYMPFLFNTEEKVRAAVAEGSPVRTVLEEEIAKTGGQVLYWQAYGGAILLSQGGPIRTPE
DMKGKKARVFGKTLGDFVTAAGGAPTLISGSEQYLAYQRGTVDVGMTGVSGVKSRKLWEVMDTITKTNHANIEFVVVVNS
DWWAGLSPELQGHIKAAAQVAQDDVRDRMSGIEAAAYKAAEENGMTIVELSDAELSAWQEVAQPVYDAYLEATGEAGQKI
LDALGAGGS

Sequences:

>Translated_329_residues
MFRNAILGAVALTALSGAAIAQEKMRISLQLPLTSHLGENLVLFEKEVEERTGGAIDVEIYDSATLYKDKEVPAAVGSGA
IEAGVASLTRYVGDAPVVDVFYMPFLFNTEEKVRAAVAEGSPVRTVLEEEIAKTGGQVLYWQAYGGAILLSQGGPIRTPE
DMKGKKARVFGKTLGDFVTAAGGAPTLISGSEQYLAYQRGTVDVGMTGVSGVKSRKLWEVMDTITKTNHANIEFVVVVNS
DWWAGLSPELQGHIKAAAQVAQDDVRDRMSGIEAAAYKAAEENGMTIVELSDAELSAWQEVAQPVYDAYLEATGEAGQKI
LDALGAGGS
>Mature_329_residues
MFRNAILGAVALTALSGAAIAQEKMRISLQLPLTSHLGENLVLFEKEVEERTGGAIDVEIYDSATLYKDKEVPAAVGSGA
IEAGVASLTRYVGDAPVVDVFYMPFLFNTEEKVRAAVAEGSPVRTVLEEEIAKTGGQVLYWQAYGGAILLSQGGPIRTPE
DMKGKKARVFGKTLGDFVTAAGGAPTLISGSEQYLAYQRGTVDVGMTGVSGVKSRKLWEVMDTITKTNHANIEFVVVVNS
DWWAGLSPELQGHIKAAAQVAQDDVRDRMSGIEAAAYKAAEENGMTIVELSDAELSAWQEVAQPVYDAYLEATGEAGQKI
LDALGAGGS

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=252, Percent_Identity=26.5873015873016, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 34922; Mature: 34922

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNAILGAVALTALSGAAIAQEKMRISLQLPLTSHLGENLVLFEKEVEERTGGAIDVEI
CCCHHHHHHHHHHHHCCHHHHHHHEEEEEECCHHHHCCCCEEEEEHHHHHHCCCEEEEEE
YDSATLYKDKEVPAAVGSGAIEAGVASLTRYVGDAPVVDVFYMPFLFNTEEKVRAAVAEG
ECCEEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCC
SPVRTVLEEEIAKTGGQVLYWQAYGGAILLSQGGPIRTPEDMKGKKARVFGKTLGDFVTA
CCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
AGGAPTLISGSEQYLAYQRGTVDVGMTGVSGVKSRKLWEVMDTITKTNHANIEFVVVVNS
CCCCCEEECCCHHHEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC
DWWAGLSPELQGHIKAAAQVAQDDVRDRMSGIEAAAYKAAEENGMTIVELSDAELSAWQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VAQPVYDAYLEATGEAGQKILDALGAGGS
HHHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFRNAILGAVALTALSGAAIAQEKMRISLQLPLTSHLGENLVLFEKEVEERTGGAIDVEI
CCCHHHHHHHHHHHHCCHHHHHHHEEEEEECCHHHHCCCCEEEEEHHHHHHCCCEEEEEE
YDSATLYKDKEVPAAVGSGAIEAGVASLTRYVGDAPVVDVFYMPFLFNTEEKVRAAVAEG
ECCEEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCC
SPVRTVLEEEIAKTGGQVLYWQAYGGAILLSQGGPIRTPEDMKGKKARVFGKTLGDFVTA
CCHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC
AGGAPTLISGSEQYLAYQRGTVDVGMTGVSGVKSRKLWEVMDTITKTNHANIEFVVVVNS
CCCCCEEECCCHHHEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC
DWWAGLSPELQGHIKAAAQVAQDDVRDRMSGIEAAAYKAAEENGMTIVELSDAELSAWQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
VAQPVYDAYLEATGEAGQKILDALGAGGS
HHHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]