Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

Click here to switch to the map view.

The map label for this gene is yhbS [C]

Identifier: 110679427

GI number: 110679427

Start: 2049910

End: 2050401

Strand: Direct

Name: yhbS [C]

Synonym: RD1_2153

Alternate gene names: 110679427

Gene position: 2049910-2050401 (Clockwise)

Preceding gene: 110679425

Following gene: 110679428

Centisome position: 49.6

GC content: 65.45

Gene sequence:

>492_bases
GTGTATACCCTGACCCATGAAACCGAGCAGGACCATCACGAGGTCGAAGCGCTTTATGATCTGTGTTTTGCGCCGGGCCG
TGAGGCTTTGTCGTCCTATCGGTTGCGGGACGATGTGCCAGCGGTTGAAAACCTCAGCCATGTTGCGCGGGATCGGGATG
GCATCCTTGGCGGGGCGATCCGCTATTGGCCGGTGCGGATTGGCGAGGCGAGTGCGCTGCTCTTGGGGCCGGTTGCGGTA
CACCCCACCCGTCAGGGCGAGGGGCTGGCGTCGCTGTTGATCCGCAGCACACTTGAACTGGCCGCAGAGGCGGGGTGGCA
GCGCGTGATGCTCGTGGGGGACGCGCCCTATTACCAGCGGTATCAGTTCGCACGCCTGAGCGATGTCACTATGCCACCGC
CGACGAATCCTGACCGGGTGTTGGGGCGGGCGCTGGTGCCGGGGGCCTGGGACGGGGTGGCTGGTGAGGTGACGCGCTGG
CGGGCGGATTGA

Upstream 100 bases:

>100_bases
AGAACATGATCACTCCTGATGGTTTGCAGGCGGCATATCCCATGTGATAGGGCCGGACCACCTGAAACACGATGCAATCC
CCAAACGGCCCTTTATTCCT

Downstream 100 bases:

>100_bases
AATTGCACCCTGCCTATCCCATCTTGAACGCAAGGAGGGCATATGGACCTGATCAACGTCAACGACCTGCCGGATACCGA
GGCACGACTGGACGCACTGG

Product: acetyltransferase, putative

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; Acetyltransferase Protein; GCN5-Like N-Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase-Like; GNAT Family Acetyltransferase; Gcn5-Related N-Acetyltransferase; Acetyltransferase Family Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MYTLTHETEQDHHEVEALYDLCFAPGREALSSYRLRDDVPAVENLSHVARDRDGILGGAIRYWPVRIGEASALLLGPVAV
HPTRQGEGLASLLIRSTLELAAEAGWQRVMLVGDAPYYQRYQFARLSDVTMPPPTNPDRVLGRALVPGAWDGVAGEVTRW
RAD

Sequences:

>Translated_163_residues
MYTLTHETEQDHHEVEALYDLCFAPGREALSSYRLRDDVPAVENLSHVARDRDGILGGAIRYWPVRIGEASALLLGPVAV
HPTRQGEGLASLLIRSTLELAAEAGWQRVMLVGDAPYYQRYQFARLSDVTMPPPTNPDRVLGRALVPGAWDGVAGEVTRW
RAD
>Mature_163_residues
MYTLTHETEQDHHEVEALYDLCFAPGREALSSYRLRDDVPAVENLSHVARDRDGILGGAIRYWPVRIGEASALLLGPVAV
HPTRQGEGLASLLIRSTLELAAEAGWQRVMLVGDAPYYQRYQFARLSDVTMPPPTNPDRVLGRALVPGAWDGVAGEVTRW
RAD

Specific function: Unknown

COG id: COG3153

COG function: function code R; Predicted acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 18063; Mature: 18063

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTLTHETEQDHHEVEALYDLCFAPGREALSSYRLRDDVPAVENLSHVARDRDGILGGAI
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCE
RYWPVRIGEASALLLGPVAVHPTRQGEGLASLLIRSTLELAAEAGWQRVMLVGDAPYYQR
EEEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
YQFARLSDVTMPPPTNPDRVLGRALVPGAWDGVAGEVTRWRAD
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MYTLTHETEQDHHEVEALYDLCFAPGREALSSYRLRDDVPAVENLSHVARDRDGILGGAI
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCE
RYWPVRIGEASALLLGPVAVHPTRQGEGLASLLIRSTLELAAEAGWQRVMLVGDAPYYQR
EEEEEEECCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHH
YQFARLSDVTMPPPTNPDRVLGRALVPGAWDGVAGEVTRWRAD
HHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA