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The map label for this gene is surF

Identifier: 110679415

GI number: 110679415

Start: 2038279

End: 2038959

Strand: Direct

Name: surF

Synonym: RD1_2140

Alternate gene names: NA

Gene position: 2038279-2038959 (Clockwise)

Preceding gene: 110679414

Following gene: 110679416

Centisome position: 49.32

GC content: 61.23

Gene sequence:

>681_bases
ATGGGCCGGTTGGTGTTTCTGGTGGTTATAGGGCTGGGCGGGGCGGCAATCCTGATCAGCCTTGGCGTTTGGCAAGTGCA
GCGTCTGGCGTGGAAAGAAGGCGTGATCGCTCAAATCAACAGCCGCATTGCGGCCGAACCGGTGGCGCTGCCGATGCAGT
TGGACCCGACACGCGACGCCTATCTGCCCGTGCGGGTGACGGGCACGTTGCGCGCGGATTATATCAGGGTGCTTGTGTCC
AAAAAGGACGTCGGTGCGGGCTACCGGATCATCCGACCACTGTTGCACCCCGACGGTGACATCCTGATCGACCTCGGCTT
TGTGACGACCGAAAACGCCGCCGGTCTCAAGTTCGAGGAAGGCCCGCCGCTGAACATCGTGGGCAACCTGCAATGGCCGC
AGGAAGTCGACGGATTTACCCCGGAACCTGATCTTGCGCGCAATATCTGGTTTGCCCGCGACGTTGATGCCATGGCGGCA
GCGCTCGGGACGCGGCCGATCCTCGTGGTGCGCCGGGATGCGCCGCAACTCGGGGGGCCTTTGTCGCCAATGCCTGTGGA
CACGCGCGCGATTCCGAACGATCACTTGCAATATGCGGTAACGTGGTTTTCCCTTGCGGCAATCTGGTCCCTGATGACTT
TCTTCTTTCTCCGCCGGAAATCCGGCGCAATCAAAAGCTGA

Upstream 100 bases:

>100_bases
GGGTCAGCGTGATGCCCGGCGCGCACTAGGCGTTCCTTCAGGGTTTGAAATCAAAGCGCGCGTTTTTTCGCGCGCTTTTC
TTTGGGAAAGGCAGCACCGA

Downstream 100 bases:

>100_bases
ACGATATGCAGTATATCTCGACCCGTGGCACGGCCCCTGTGCTGAATTTCGAAGAGGCGATGTTGAGCGGCCTTGCCCGT
GACGGCGGCCTCTATGTGCC

Product: SURF1 family protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGRLVFLVVIGLGGAAILISLGVWQVQRLAWKEGVIAQINSRIAAEPVALPMQLDPTRDAYLPVRVTGTLRADYIRVLVS
KKDVGAGYRIIRPLLHPDGDILIDLGFVTTENAAGLKFEEGPPLNIVGNLQWPQEVDGFTPEPDLARNIWFARDVDAMAA
ALGTRPILVVRRDAPQLGGPLSPMPVDTRAIPNDHLQYAVTWFSLAAIWSLMTFFFLRRKSGAIKS

Sequences:

>Translated_226_residues
MGRLVFLVVIGLGGAAILISLGVWQVQRLAWKEGVIAQINSRIAAEPVALPMQLDPTRDAYLPVRVTGTLRADYIRVLVS
KKDVGAGYRIIRPLLHPDGDILIDLGFVTTENAAGLKFEEGPPLNIVGNLQWPQEVDGFTPEPDLARNIWFARDVDAMAA
ALGTRPILVVRRDAPQLGGPLSPMPVDTRAIPNDHLQYAVTWFSLAAIWSLMTFFFLRRKSGAIKS
>Mature_225_residues
GRLVFLVVIGLGGAAILISLGVWQVQRLAWKEGVIAQINSRIAAEPVALPMQLDPTRDAYLPVRVTGTLRADYIRVLVSK
KDVGAGYRIIRPLLHPDGDILIDLGFVTTENAAGLKFEEGPPLNIVGNLQWPQEVDGFTPEPDLARNIWFARDVDAMAAA
LGTRPILVVRRDAPQLGGPLSPMPVDTRAIPNDHLQYAVTWFSLAAIWSLMTFFFLRRKSGAIKS

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=227, Percent_Identity=32.5991189427313, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17864366, Length=228, Percent_Identity=30.2631578947368, Blast_Score=84, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 24802; Mature: 24671

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLVFLVVIGLGGAAILISLGVWQVQRLAWKEGVIAQINSRIAAEPVALPMQLDPTRDA
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEECEEECCCCCC
YLPVRVTGTLRADYIRVLVSKKDVGAGYRIIRPLLHPDGDILIDLGFVTTENAAGLKFEE
EEEEEEECCHHHHHHEEEHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCEECC
GPPLNIVGNLQWPQEVDGFTPEPDLARNIWFARDVDAMAAALGTRPILVVRRDAPQLGGP
CCCEEEEECCCCHHHCCCCCCCCCHHHHEEECCCHHHHHHHHCCCCEEEEECCCCCCCCC
LSPMPVDTRAIPNDHLQYAVTWFSLAAIWSLMTFFFLRRKSGAIKS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GRLVFLVVIGLGGAAILISLGVWQVQRLAWKEGVIAQINSRIAAEPVALPMQLDPTRDA
CEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEECEEECCCCCC
YLPVRVTGTLRADYIRVLVSKKDVGAGYRIIRPLLHPDGDILIDLGFVTTENAAGLKFEE
EEEEEEECCHHHHHHEEEHCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCEECC
GPPLNIVGNLQWPQEVDGFTPEPDLARNIWFARDVDAMAAALGTRPILVVRRDAPQLGGP
CCCEEEEECCCCHHHCCCCCCCCCHHHHEEECCCHHHHHHHHCCCCEEEEECCCCCCCCC
LSPMPVDTRAIPNDHLQYAVTWFSLAAIWSLMTFFFLRRKSGAIKS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA