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The map label for this gene is 110679404

Identifier: 110679404

GI number: 110679404

Start: 2027001

End: 2028053

Strand: Reverse

Name: 110679404

Synonym: RD1_2129

Alternate gene names: NA

Gene position: 2028053-2027001 (Counterclockwise)

Preceding gene: 110679405

Following gene: 110679403

Centisome position: 49.07

GC content: 57.45

Gene sequence:

>1053_bases
ATGGCAGATACGAATACGAAAACGCGCAGCGATGCGACGCATGCGGCGGGGACACCATCGGAGAAAGACTTCGGCGGGTT
TTCCCGCTCTCAGGTGGCGATGGTGATGACCAACCCGAACCTCGACGACAATCCCATCGTCTATGCGAACGAAGCTTTCG
TGCGGACCACCGGCTATTCCCATAGTGCGATCGTGGGGCGTAATTGCCGCTTCCTGCAAGGTGAAGATACGGATAAGGCG
GCTGTGGATGTCCTGCGCCATGCAATCGAACTCGATCAGAATGTGACGGTCGATATTCTGAACTACAAAGCCAATGGTGC
GCCTTTCATGAACCGGCTGATTGTATCGCCGATCATGGACGCACAGGGCAGGACCGAATACTTCATCGGCATTCAGAAAG
AGTTGCGCAACGGAGAGCGGGATCCGAACGCGGAAAAAGTGCATGACCATCTGATGGAAGTGCAAAACCGGGTTCAATCC
GATCTGTCCATGATCATTACGATGATCCGGAACCAGTCGGCAGCAACCTCGGTTCCGGATGATTTCGCGGCCCTGAAGCG
GCGCGTCGAGACGCTGGAACTCCTTTATGAAGAGATGAAGCTGGCGGATCAGCACGCAAATCGCGACGCGGTTCAGATGG
GCAGTTTCGTCTCCCGGCTGGCCAGTGCGATTGCCCATACGGAAGGCCGCCCCGGCATCCGCATGAATATGCAGATCGAA
CCGCTTGAGGTCTCCATCGAGGTGGCGACGCGTGTAGGTCTTGTGGTGTCGGAACTGCTGACCAATGCGTTTCAGCATGC
GTTTGAACGCATGGACACGGGTCTTGTGGAAATCCGGATGTCGCAATTGAGCGCGGGCGGTCTGCGCCTAATTGTATCCG
ACGATGGGATCGGCATACCGCGCTCGATGGAATGGCCCTCCAGCGCCACCGTTGGCGGGCGGATCGTCTGCGGCCTGATT
GAAGGTCTGGAAGGAACACTGCACCTCGGCCGTGGGGCTGCGGGCAGCTTTGTAACAATTGATGTGCCGGCAGGCGCGTC
GGTCACCGAATAG

Upstream 100 bases:

>100_bases
AGCATCCACCTGCCCGGCATCTATGTGCATCGCCTGATACAGGGCGAACACGAAAAACGCATTGAACAGCGCACCACAAG
GGCCGCGTAAGGCGCAGGGT

Downstream 100 bases:

>100_bases
GATAGGACTTTTATGCCTTGGGATCGAAACCAGATGGCGGCGCGTGCGGCGCAAGAACTTGAAGACGGCTGGTATGTCAA
CCTCGGGATCGGCATCCCGA

Product: sensory box histidine kinase, putative

Products: NA

Alternate protein names: EL346-LOV-histidine kinase; EL346-LOV-HK [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MADTNTKTRSDATHAAGTPSEKDFGGFSRSQVAMVMTNPNLDDNPIVYANEAFVRTTGYSHSAIVGRNCRFLQGEDTDKA
AVDVLRHAIELDQNVTVDILNYKANGAPFMNRLIVSPIMDAQGRTEYFIGIQKELRNGERDPNAEKVHDHLMEVQNRVQS
DLSMIITMIRNQSAATSVPDDFAALKRRVETLELLYEEMKLADQHANRDAVQMGSFVSRLASAIAHTEGRPGIRMNMQIE
PLEVSIEVATRVGLVVSELLTNAFQHAFERMDTGLVEIRMSQLSAGGLRLIVSDDGIGIPRSMEWPSSATVGGRIVCGLI
EGLEGTLHLGRGAAGSFVTIDVPAGASVTE

Sequences:

>Translated_350_residues
MADTNTKTRSDATHAAGTPSEKDFGGFSRSQVAMVMTNPNLDDNPIVYANEAFVRTTGYSHSAIVGRNCRFLQGEDTDKA
AVDVLRHAIELDQNVTVDILNYKANGAPFMNRLIVSPIMDAQGRTEYFIGIQKELRNGERDPNAEKVHDHLMEVQNRVQS
DLSMIITMIRNQSAATSVPDDFAALKRRVETLELLYEEMKLADQHANRDAVQMGSFVSRLASAIAHTEGRPGIRMNMQIE
PLEVSIEVATRVGLVVSELLTNAFQHAFERMDTGLVEIRMSQLSAGGLRLIVSDDGIGIPRSMEWPSSATVGGRIVCGLI
EGLEGTLHLGRGAAGSFVTIDVPAGASVTE
>Mature_349_residues
ADTNTKTRSDATHAAGTPSEKDFGGFSRSQVAMVMTNPNLDDNPIVYANEAFVRTTGYSHSAIVGRNCRFLQGEDTDKAA
VDVLRHAIELDQNVTVDILNYKANGAPFMNRLIVSPIMDAQGRTEYFIGIQKELRNGERDPNAEKVHDHLMEVQNRVQSD
LSMIITMIRNQSAATSVPDDFAALKRRVETLELLYEEMKLADQHANRDAVQMGSFVSRLASAIAHTEGRPGIRMNMQIEP
LEVSIEVATRVGLVVSELLTNAFQHAFERMDTGLVEIRMSQLSAGGLRLIVSDDGIGIPRSMEWPSSATVGGRIVCGLIE
GLEGTLHLGRGAAGSFVTIDVPAGASVTE

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF07568 HisKA_2; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38128; Mature: 37996

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTNTKTRSDATHAAGTPSEKDFGGFSRSQVAMVMTNPNLDDNPIVYANEAFVRTTGYS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCC
HSAIVGRNCRFLQGEDTDKAAVDVLRHAIELDQNVTVDILNYKANGAPFMNRLIVSPIMD
CCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
AQGRTEYFIGIQKELRNGERDPNAEKVHDHLMEVQNRVQSDLSMIITMIRNQSAATSVPD
CCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DFAALKRRVETLELLYEEMKLADQHANRDAVQMGSFVSRLASAIAHTEGRPGIRMNMQIE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PLEVSIEVATRVGLVVSELLTNAFQHAFERMDTGLVEIRMSQLSAGGLRLIVSDDGIGIP
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCC
RSMEWPSSATVGGRIVCGLIEGLEGTLHLGRGAAGSFVTIDVPAGASVTE
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
ADTNTKTRSDATHAAGTPSEKDFGGFSRSQVAMVMTNPNLDDNPIVYANEAFVRTTGYS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCC
HSAIVGRNCRFLQGEDTDKAAVDVLRHAIELDQNVTVDILNYKANGAPFMNRLIVSPIMD
CCEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
AQGRTEYFIGIQKELRNGERDPNAEKVHDHLMEVQNRVQSDLSMIITMIRNQSAATSVPD
CCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
DFAALKRRVETLELLYEEMKLADQHANRDAVQMGSFVSRLASAIAHTEGRPGIRMNMQIE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PLEVSIEVATRVGLVVSELLTNAFQHAFERMDTGLVEIRMSQLSAGGLRLIVSDDGIGIP
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCC
RSMEWPSSATVGGRIVCGLIEGLEGTLHLGRGAAGSFVTIDVPAGASVTE
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA