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The map label for this gene is dxnH [H]

Identifier: 110679403

GI number: 110679403

Start: 2026362

End: 2026988

Strand: Reverse

Name: dxnH [H]

Synonym: RD1_2128

Alternate gene names: 110679403

Gene position: 2026988-2026362 (Counterclockwise)

Preceding gene: 110679404

Following gene: 110679401

Centisome position: 49.04

GC content: 60.61

Gene sequence:

>627_bases
ATGCCTTGGGATCGAAACCAGATGGCGGCGCGTGCGGCGCAAGAACTTGAAGACGGCTGGTATGTCAACCTCGGGATCGG
CATCCCGACGCTGGTCAGCAATTACATCCCCGACGGCATCGAAGTGACGCTGCAGTCGGAAAACGGCATGCTGGGCATGG
GCCCTTTCCCCATCGAGGGTACCGAGGATGCGGACCTCATCAACGCGGGCAAACAGACCATCACGGAACTGCCGCAGACC
GCCTATTTCGACAGCGCCCAGTCCTTCGGCATGATCCGGGGCGGCAAGATTGCGATGGCGATCCTCGGGGCAATGGAAGT
GGCCGAAAACGGCGATCTGGCGAACTGGATGATTCCGGGCAAGCTGGTCAAGGGTATGGGCGGCGCGATGGACCTTGTAG
CGGGCGTCGGGCGCGTTGTCGTGGTGATGGATCACACCTCGAAACACGGCGACAGCAAGCTGCTGCGCGAATGTACCTTG
CCGTTGACGGGCAAAAATGTCGTGGATCGGATCATCACGAATCTCGGCGTGCTTGACGTGGTCGAGGGTGGTTTAAAAAT
CGTCGAGACGGCGGATGGCGTCAGCGAAGAAGACCTGCGCGCCGCGACCGAGGCGACAATCGTCTGA

Upstream 100 bases:

>100_bases
TCTGGAAGGAACACTGCACCTCGGCCGTGGGGCTGCGGGCAGCTTTGTAACAATTGATGTGCCGGCAGGCGCGTCGGTCA
CCGAATAGGATAGGACTTTT

Downstream 100 bases:

>100_bases
TACCGCTTTGAGGCAGGCCGTCGCGTTGCACGATACGTGCTACCTCGGGCACCTCATCCGCCGCGCTCGTTCAGCCCGGC
AAAAACACATCCGTCCGACA

Product: 3-oxoadipate CoA-succinyl transferase, beta subunit

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPWDRNQMAARAAQELEDGWYVNLGIGIPTLVSNYIPDGIEVTLQSENGMLGMGPFPIEGTEDADLINAGKQTITELPQT
AYFDSAQSFGMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHTSKHGDSKLLRECTL
PLTGKNVVDRIITNLGVLDVVEGGLKIVETADGVSEEDLRAATEATIV

Sequences:

>Translated_208_residues
MPWDRNQMAARAAQELEDGWYVNLGIGIPTLVSNYIPDGIEVTLQSENGMLGMGPFPIEGTEDADLINAGKQTITELPQT
AYFDSAQSFGMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHTSKHGDSKLLRECTL
PLTGKNVVDRIITNLGVLDVVEGGLKIVETADGVSEEDLRAATEATIV
>Mature_207_residues
PWDRNQMAARAAQELEDGWYVNLGIGIPTLVSNYIPDGIEVTLQSENGMLGMGPFPIEGTEDADLINAGKQTITELPQTA
YFDSAQSFGMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHTSKHGDSKLLRECTLP
LTGKNVVDRIITNLGVLDVVEGGLKIVETADGVSEEDLRAATEATIV

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=201, Percent_Identity=55.2238805970149, Blast_Score=226, Evalue=1e-59,
Organism=Homo sapiens, GI11545841, Length=201, Percent_Identity=56.2189054726368, Blast_Score=221, Evalue=5e-58,
Organism=Escherichia coli, GI1788552, Length=201, Percent_Identity=51.2437810945274, Blast_Score=214, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17531517, Length=202, Percent_Identity=56.9306930693069, Blast_Score=231, Evalue=2e-61,
Organism=Drosophila melanogaster, GI21358325, Length=205, Percent_Identity=56.5853658536585, Blast_Score=233, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24655794, Length=205, Percent_Identity=56.5853658536585, Blast_Score=233, Evalue=8e-62,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22057; Mature: 21925

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWDRNQMAARAAQELEDGWYVNLGIGIPTLVSNYIPDGIEVTLQSENGMLGMGPFPIEG
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCC
TEDADLINAGKQTITELPQTAYFDSAQSFGMIRGGKIAMAILGAMEVAENGDLANWMIPG
CCCHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCH
KLVKGMGGAMDLVAGVGRVVVVMDHTSKHGDSKLLRECTLPLTGKNVVDRIITNLGVLDV
HHHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
VEGGLKIVETADGVSEEDLRAATEATIV
HHCCEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PWDRNQMAARAAQELEDGWYVNLGIGIPTLVSNYIPDGIEVTLQSENGMLGMGPFPIEG
CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCC
TEDADLINAGKQTITELPQTAYFDSAQSFGMIRGGKIAMAILGAMEVAENGDLANWMIPG
CCCHHHHHHHHHHHHHCCHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCH
KLVKGMGGAMDLVAGVGRVVVVMDHTSKHGDSKLLRECTLPLTGKNVVDRIITNLGVLDV
HHHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
VEGGLKIVETADGVSEEDLRAATEATIV
HHCCEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]