Click here to switch to the map view.

The map label for this gene is 110679401

Identifier: 110679401

GI number: 110679401

Start: 2024835

End: 2025131

Strand: Reverse

Name: 110679401

Synonym: RD1_2126

Alternate gene names: NA

Gene position: 2025131-2024835 (Counterclockwise)

Preceding gene: 110679403

Following gene: 110679399

Centisome position: 49.0

GC content: 60.61

Gene sequence:

>297_bases
ATGATGAAATCTTTCAATAAATTCCGCACGGACGAAGACGGTGCCGTCACGGTCGACTGGGTCGTGTTGACGGCTGCTGT
CGTTGGTCTGGCTGTTGCGGCGTATAGCTCGATCCAGACGGGCGCGACAGAACTGACCGGCAAGACCAGCACGTTCCTTG
GTGCGCAGGACCCGGCACTTGCCGCGGGCGGCAACATTCAGGGCGTCGTTGGCGGTGGTACAACAACACCGGCGACCACG
ACACCAGCCACAACGACACCAAGCGCGACAACACCCGCCACGACGACAACGGAGTAA

Upstream 100 bases:

>100_bases
ATGTCCGCATACCAAGTCGGGCCGATCAAGATACGCAAACGGTCACTGAAATCGACAAGGTGCGTACGTTTAATCAAGTG
ATCCTTTGGAGGGACAAGGC

Downstream 100 bases:

>100_bases
AAGCCCCAACCGTCTATATCCATAGGGGGGCCGCAATCTGCACGCAGACTGCGGCCCCCTTCTTTTCAAAGGCTGCTATG
CAGGGGGCACGGGGTGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MMKSFNKFRTDEDGAVTVDWVVLTAAVVGLAVAAYSSIQTGATELTGKTSTFLGAQDPALAAGGNIQGVVGGGTTTPATT
TPATTTPSATTPATTTTE

Sequences:

>Translated_98_residues
MMKSFNKFRTDEDGAVTVDWVVLTAAVVGLAVAAYSSIQTGATELTGKTSTFLGAQDPALAAGGNIQGVVGGGTTTPATT
TPATTTPSATTPATTTTE
>Mature_98_residues
MMKSFNKFRTDEDGAVTVDWVVLTAAVVGLAVAAYSSIQTGATELTGKTSTFLGAQDPALAAGGNIQGVVGGGTTTPATT
TPATTTPSATTPATTTTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9697; Mature: 9697

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKSFNKFRTDEDGAVTVDWVVLTAAVVGLAVAAYSSIQTGATELTGKTSTFLGAQDPAL
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCE
AAGGNIQGVVGGGTTTPATTTPATTTPSATTPATTTTE
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKSFNKFRTDEDGAVTVDWVVLTAAVVGLAVAAYSSIQTGATELTGKTSTFLGAQDPAL
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCE
AAGGNIQGVVGGGTTTPATTTPATTTPSATTPATTTTE
ECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA