Definition Roseobacter denitrificans OCh 114, complete genome.
Accession NC_008209
Length 4,133,097

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The map label for this gene is 110679345

Identifier: 110679345

GI number: 110679345

Start: 1971252

End: 1972271

Strand: Reverse

Name: 110679345

Synonym: RD1_2064

Alternate gene names: NA

Gene position: 1972271-1971252 (Counterclockwise)

Preceding gene: 110679351

Following gene: 110679344

Centisome position: 47.72

GC content: 62.06

Gene sequence:

>1020_bases
ATGCACAGCTATGATCACAAAACGCTGGAGGCGTATCTGGCCACACACGTGCCGGGATTCGGGTCGCTGGACGGCATCGA
AAAATTCTCGGATGGGCAATCCAACCCGACCTACCGGCTCACCAGTGGGGGCACGGATTTCGTGCTGCGCGCCAAACCCC
CCGGTGTCCTGCTGAAATCCGCCCATGCGGTGGATCGCGAATTCCGCGTGATGCAGGCGCTGGCCTGCACAGATGTGCCG
GTGCCCCATGTGCTGCATCTGAGCGGTGAAGACACCCCGCTGGGCGCGCAGTTCATGGTGATGGAGATGGTCAAAGGCCG
CATCTTCTGGGATCCGGCTCTGACCGGCATGTCCCCGGCAGAGCGAGCCGCGATCTATGACGCCATGAACGAAACGCTCG
CTCGGTTGCACAGCGTTGTGCCCGACAGCATCGGGTTGGGCGATTACGGCAAGCCGGGCAATTACTTCGAACGGCAAGTG
ACCCGCTGGTCTGGTCAATACCAGCAAGCTGCGCGCGCGCCGCTGCCTGATGCGCTCTGGCTCATGGAATGGCTCAGCAC
AAACATGGTGAGCGATGACGGCGCGAGCAGTATCGTGCATGGCGATTACCGCATCGACAATATGATCTTTGCGCCCGACG
CGCCGCGCGTTCTGGCCGTTTTGGATTGGGAGTTGTCCACCCTCGGCCACCCGCTGGCCGACCTTGCCTATCAGTGCATG
CATTGGCGGCTGCCCCATGCCGGTCATTTTCGCGGCCTGGGGAGGGTGGATCGTGCCGCCCTTGGGTTGCCGGATGAGGC
CGCCTATGTGGCCGCCTATTGCGCGCGGCGACAGATTTCGGTGCCGGACAACTGGACATTCTATCTGGTGTTTTCCTATT
TCCGCCTGCTTGCGATCCTGCAAGGGGTGCGGCGCCGCGGGCTGGAGGGCAACGCCTCAAACCCCAAGGATACAGAGCGG
TTGCGCGATGTGATTGCGCTTTTGGCCCACGATGCGCGCCAGCTTGCACAAACGGCATGA

Upstream 100 bases:

>100_bases
ATCACCGTCTCCTTCAGCCCGCCCAACGGGGCTTTCCCCCGCGGCACAGGTTTGCTTAGATCACCTGCGGTGTCCATAAG
ACAAATCAAGGGGGATGCGC

Downstream 100 bases:

>100_bases
CCTGCTTTGACCGGCTGAAGGCTTGACGCCGTGGGCAGACCTGTGATCCTGCTTTGGCGGCACCGCGATTTTCGAGGATT
ACGATGAACCCCAAACACGC

Product: phosphotransferase, putative

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Phosphotransferase Family; Acyl-CoA Dehydrogenase; Acyl-Co A Dehydrogenase; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Family Member

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MHSYDHKTLEAYLATHVPGFGSLDGIEKFSDGQSNPTYRLTSGGTDFVLRAKPPGVLLKSAHAVDREFRVMQALACTDVP
VPHVLHLSGEDTPLGAQFMVMEMVKGRIFWDPALTGMSPAERAAIYDAMNETLARLHSVVPDSIGLGDYGKPGNYFERQV
TRWSGQYQQAARAPLPDALWLMEWLSTNMVSDDGASSIVHGDYRIDNMIFAPDAPRVLAVLDWELSTLGHPLADLAYQCM
HWRLPHAGHFRGLGRVDRAALGLPDEAAYVAAYCARRQISVPDNWTFYLVFSYFRLLAILQGVRRRGLEGNASNPKDTER
LRDVIALLAHDARQLAQTA

Sequences:

>Translated_339_residues
MHSYDHKTLEAYLATHVPGFGSLDGIEKFSDGQSNPTYRLTSGGTDFVLRAKPPGVLLKSAHAVDREFRVMQALACTDVP
VPHVLHLSGEDTPLGAQFMVMEMVKGRIFWDPALTGMSPAERAAIYDAMNETLARLHSVVPDSIGLGDYGKPGNYFERQV
TRWSGQYQQAARAPLPDALWLMEWLSTNMVSDDGASSIVHGDYRIDNMIFAPDAPRVLAVLDWELSTLGHPLADLAYQCM
HWRLPHAGHFRGLGRVDRAALGLPDEAAYVAAYCARRQISVPDNWTFYLVFSYFRLLAILQGVRRRGLEGNASNPKDTER
LRDVIALLAHDARQLAQTA
>Mature_339_residues
MHSYDHKTLEAYLATHVPGFGSLDGIEKFSDGQSNPTYRLTSGGTDFVLRAKPPGVLLKSAHAVDREFRVMQALACTDVP
VPHVLHLSGEDTPLGAQFMVMEMVKGRIFWDPALTGMSPAERAAIYDAMNETLARLHSVVPDSIGLGDYGKPGNYFERQV
TRWSGQYQQAARAPLPDALWLMEWLSTNMVSDDGASSIVHGDYRIDNMIFAPDAPRVLAVLDWELSTLGHPLADLAYQCM
HWRLPHAGHFRGLGRVDRAALGLPDEAAYVAAYCARRQISVPDNWTFYLVFSYFRLLAILQGVRRRGLEGNASNPKDTER
LRDVIALLAHDARQLAQTA

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48976061, Length=307, Percent_Identity=46.9055374592834, Blast_Score=286, Evalue=3e-77,
Organism=Homo sapiens, GI211971008, Length=307, Percent_Identity=46.9055374592834, Blast_Score=285, Evalue=3e-77,
Organism=Homo sapiens, GI38505218, Length=341, Percent_Identity=42.8152492668622, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=38.8198757763975, Blast_Score=214, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37633; Mature: 37633

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSYDHKTLEAYLATHVPGFGSLDGIEKFSDGQSNPTYRLTSGGTDFVLRAKPPGVLLKS
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHH
AHAVDREFRVMQALACTDVPVPHVLHLSGEDTPLGAQFMVMEMVKGRIFWDPALTGMSPA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHH
ERAAIYDAMNETLARLHSVVPDSIGLGDYGKPGNYFERQVTRWSGQYQQAARAPLPDALW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCHHHH
LMEWLSTNMVSDDGASSIVHGDYRIDNMIFAPDAPRVLAVLDWELSTLGHPLADLAYQCM
HHHHHHHCCCCCCCCCCEEECCEEECCEEECCCCCCEEEEECCHHHHHCCCHHHHHHHHH
HWRLPHAGHFRGLGRVDRAALGLPDEAAYVAAYCARRQISVPDNWTFYLVFSYFRLLAIL
HHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QGVRRRGLEGNASNPKDTERLRDVIALLAHDARQLAQTA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHSYDHKTLEAYLATHVPGFGSLDGIEKFSDGQSNPTYRLTSGGTDFVLRAKPPGVLLKS
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHH
AHAVDREFRVMQALACTDVPVPHVLHLSGEDTPLGAQFMVMEMVKGRIFWDPALTGMSPA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHH
ERAAIYDAMNETLARLHSVVPDSIGLGDYGKPGNYFERQVTRWSGQYQQAARAPLPDALW
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCHHHH
LMEWLSTNMVSDDGASSIVHGDYRIDNMIFAPDAPRVLAVLDWELSTLGHPLADLAYQCM
HHHHHHHCCCCCCCCCCEEECCEEECCEEECCCCCCEEEEECCHHHHHCCCHHHHHHHHH
HWRLPHAGHFRGLGRVDRAALGLPDEAAYVAAYCARRQISVPDNWTFYLVFSYFRLLAIL
HHCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
QGVRRRGLEGNASNPKDTERLRDVIALLAHDARQLAQTA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA