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The map label for this gene is 110679344

Identifier: 110679344

GI number: 110679344

Start: 1969975

End: 1971168

Strand: Reverse

Name: 110679344

Synonym: RD1_2063

Alternate gene names: NA

Gene position: 1971168-1969975 (Counterclockwise)

Preceding gene: 110679345

Following gene: 110679343

Centisome position: 47.69

GC content: 60.13

Gene sequence:

>1194_bases
ATGAACCCCAAACACGCCAGTTATGATGTTGTGATCGTCGGCGGCGGCATCTACGGCTCCAGCATTGCGTGGTGGCTGAC
GCAGATGGCGGGCTTTGACGGCCGCATCCTCGTGATCGAAAAAGACCCGACTTATGCACAGGCCGCCACCAGCCTGACCA
ACAGCTGTATCCGGCAGCAATTCTCGAACCCGACCAACATTGCGATCTCGCAATTCGGGGCGGAATTTATCCATAACTTT
CAAAAGTTTATGGGCGCGTCGGATGACGTACCCGCGCTTGCCTTGCAAAACTTCGGCTATCTCTATCTGGCCGACACAGC
CGCGCAGGCCGACACATTGCGCGAAAGCCAGCAGGTGCAGGCGCAGTTGGGCGCAGGTACCCGGCATATGCTGCGCGATG
AGATCGCCGCCGCCTACCCGTTTTACAACCTCGACGATATTCTGGCCGCCAACCATAACCGCGTGAACGAAGGGTATTTT
GACGGCGGCACCATGTTTGACTGCCTTCGGCGCACAGCGCGCAAGAACGGCGCGGAGTATCTGAGCGATGAGGTCGTCGC
CATGACGCGTGCCCGCACCCGCGTGGAAAGTGTGACGCTGAAGTCCGGCGCGACGCTCTCCTGCGGGCTGGTGGTCAATG
CATCAGGCACCCGAGCGGCTGCCACTGCGCGCATGGCGGGCCTCGACATCCCCGTGGAGGCCCGCCGCCGCTACACGTAC
ATCTTTGACGCCGCCGAACCGCTTGACCGGGATCTGCCGCTGACGATCGACCCCTCCGGTGTGCATTTCCGCACCGATGG
GCGGTATTACATGGCCGGCGGCGGGCCGGACCAGGACCCCGCAGTTGATGTCGATGATTTCGAGGCGGATCACAGTTTGT
GGGAAGAGAAATTCTGGCCCATCATCGCCCATCGCATCCCGCAGTTCGAACGGATCAAGCTGGTGAACATGTGGGTTGGA
CATTACGATTATAATACGCTGGATCAGAACGCCATTCTCGGCCCGCACCCGGAAGTGAGCAACTTTGTCTTTGTGAACGG
GTTCTCGGGTCACGGGTTGCAGCAGGCCCCGGCCATCGGGCGCGGCATCGCCGAATGGATCGCCTATGGTGCCTATCGCA
GTCTTGATCTTGCGCCCTTTGGGGTCGAACGTGTCCTGCGGGGCGAGAAATTCTTGGAAAAAGCCGTGATCTGA

Upstream 100 bases:

>100_bases
TTGCACAAACGGCATGACCTGCTTTGACCGGCTGAAGGCTTGACGCCGTGGGCAGACCTGTGATCCTGCTTTGGCGGCAC
CGCGATTTTCGAGGATTACG

Downstream 100 bases:

>100_bases
CGGCAGGGAGACAAATATGAAGAAACTGGTTTTGACAGGAGCCGCAGGTCGCCTTGGCTCTTACCTGCGCGAGCCGCTCA
CCGCGCTCTGTGACACGTTG

Product: oxidoreductase, putative

Products: NA

Alternate protein names: Oxidoreductase; Sarcosine Oxidase Subunit Beta; Sarcosine Oxidase Beta Subunit; Glycine/D-Amino Acid Oxidase Deaminating; FAD-Dependent Oxidoreductase Domain-Containing; Glycine Cleavage T-Protein; Sarcosine Oxidase Beta Subunit Family Protein; Glycine Oxidase ThiO; Sarcosine Dehydrogenase; D-Amino-Acid Dehydrogenase; Dimethylglycine Dehydrogenase; Sarcosine Oxidase Subunit Beta Family Protein; Fad Dependent Oxidoreductase; Sarcosine Deshydrogenase; Glycine Cleavage System T Protein; Glycine/D-Amino Acid Oxidase

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNPKHASYDVVIVGGGIYGSSIAWWLTQMAGFDGRILVIEKDPTYAQAATSLTNSCIRQQFSNPTNIAISQFGAEFIHNF
QKFMGASDDVPALALQNFGYLYLADTAAQADTLRESQQVQAQLGAGTRHMLRDEIAAAYPFYNLDDILAANHNRVNEGYF
DGGTMFDCLRRTARKNGAEYLSDEVVAMTRARTRVESVTLKSGATLSCGLVVNASGTRAAATARMAGLDIPVEARRRYTY
IFDAAEPLDRDLPLTIDPSGVHFRTDGRYYMAGGGPDQDPAVDVDDFEADHSLWEEKFWPIIAHRIPQFERIKLVNMWVG
HYDYNTLDQNAILGPHPEVSNFVFVNGFSGHGLQQAPAIGRGIAEWIAYGAYRSLDLAPFGVERVLRGEKFLEKAVI

Sequences:

>Translated_397_residues
MNPKHASYDVVIVGGGIYGSSIAWWLTQMAGFDGRILVIEKDPTYAQAATSLTNSCIRQQFSNPTNIAISQFGAEFIHNF
QKFMGASDDVPALALQNFGYLYLADTAAQADTLRESQQVQAQLGAGTRHMLRDEIAAAYPFYNLDDILAANHNRVNEGYF
DGGTMFDCLRRTARKNGAEYLSDEVVAMTRARTRVESVTLKSGATLSCGLVVNASGTRAAATARMAGLDIPVEARRRYTY
IFDAAEPLDRDLPLTIDPSGVHFRTDGRYYMAGGGPDQDPAVDVDDFEADHSLWEEKFWPIIAHRIPQFERIKLVNMWVG
HYDYNTLDQNAILGPHPEVSNFVFVNGFSGHGLQQAPAIGRGIAEWIAYGAYRSLDLAPFGVERVLRGEKFLEKAVI
>Mature_397_residues
MNPKHASYDVVIVGGGIYGSSIAWWLTQMAGFDGRILVIEKDPTYAQAATSLTNSCIRQQFSNPTNIAISQFGAEFIHNF
QKFMGASDDVPALALQNFGYLYLADTAAQADTLRESQQVQAQLGAGTRHMLRDEIAAAYPFYNLDDILAANHNRVNEGYF
DGGTMFDCLRRTARKNGAEYLSDEVVAMTRARTRVESVTLKSGATLSCGLVVNASGTRAAATARMAGLDIPVEARRRYTY
IFDAAEPLDRDLPLTIDPSGVHFRTDGRYYMAGGGPDQDPAVDVDDFEADHSLWEEKFWPIIAHRIPQFERIKLVNMWVG
HYDYNTLDQNAILGPHPEVSNFVFVNGFSGHGLQQAPAIGRGIAEWIAYGAYRSLDLAPFGVERVLRGEKFLEKAVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923708, Length=411, Percent_Identity=35.5231143552311, Blast_Score=261, Evalue=5e-70,
Organism=Homo sapiens, GI197927446, Length=393, Percent_Identity=22.64631043257, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI21361378, Length=393, Percent_Identity=22.64631043257, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17541536, Length=430, Percent_Identity=29.0697674418605, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI20129729, Length=419, Percent_Identity=33.1742243436754, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI17985989, Length=405, Percent_Identity=32.0987654320988, Blast_Score=197, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43878; Mature: 43878

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKHASYDVVIVGGGIYGSSIAWWLTQMAGFDGRILVIEKDPTYAQAATSLTNSCIRQQ
CCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FSNPTNIAISQFGAEFIHNFQKFMGASDDVPALALQNFGYLYLADTAAQADTLRESQQVQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHH
AQLGAGTRHMLRDEIAAAYPFYNLDDILAANHNRVNEGYFDGGTMFDCLRRTARKNGAEY
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
LSDEVVAMTRARTRVESVTLKSGATLSCGLVVNASGTRAAATARMAGLDIPVEARRRYTY
HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCCHHHCCEEEE
IFDAAEPLDRDLPLTIDPSGVHFRTDGRYYMAGGGPDQDPAVDVDDFEADHSLWEEKFWP
EEECCCCCCCCCCEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
IIAHRIPQFERIKLVNMWVGHYDYNTLDQNAILGPHPEVSNFVFVNGFSGHGLQQAPAIG
HHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHH
RGIAEWIAYGAYRSLDLAPFGVERVLRGEKFLEKAVI
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPKHASYDVVIVGGGIYGSSIAWWLTQMAGFDGRILVIEKDPTYAQAATSLTNSCIRQQ
CCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
FSNPTNIAISQFGAEFIHNFQKFMGASDDVPALALQNFGYLYLADTAAQADTLRESQQVQ
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHH
AQLGAGTRHMLRDEIAAAYPFYNLDDILAANHNRVNEGYFDGGTMFDCLRRTARKNGAEY
HHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
LSDEVVAMTRARTRVESVTLKSGATLSCGLVVNASGTRAAATARMAGLDIPVEARRRYTY
HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHHHHHHHHCCCCCHHHCCEEEE
IFDAAEPLDRDLPLTIDPSGVHFRTDGRYYMAGGGPDQDPAVDVDDFEADHSLWEEKFWP
EEECCCCCCCCCCEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
IIAHRIPQFERIKLVNMWVGHYDYNTLDQNAILGPHPEVSNFVFVNGFSGHGLQQAPAIG
HHHHHCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHH
RGIAEWIAYGAYRSLDLAPFGVERVLRGEKFLEKAVI
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA