| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is 110679339
Identifier: 110679339
GI number: 110679339
Start: 1964810
End: 1965001
Strand: Reverse
Name: 110679339
Synonym: RD1_2058
Alternate gene names: NA
Gene position: 1965001-1964810 (Counterclockwise)
Preceding gene: 110679340
Following gene: 110679338
Centisome position: 47.54
GC content: 62.5
Gene sequence:
>192_bases ATGGCCAAAGCACTTTTGCAACTGCGCGAACAGGTGCATGCCATATCCATCGGGCGATGGCCGCTCTTCGGCGCTCAGAT CACCGATCTGACGGATCACCTTGATCCTGCGCGATGGCCGCACACACCGCGGCGCTGTGTGCACAGCGCGAAGGGGCAGA CCCGCCGCCTGCGACAGCTTTTTGCGCTGTGA
Upstream 100 bases:
>100_bases GCCCCTCCCGCGCAGCGCTGGCGCTTGATCTGGCACATGCGTTCACGCTCCGTGACGTCGCGGGCTTGTGCCCCTCGCGC GGCTGCCAGGGGTTGCACGC
Downstream 100 bases:
>100_bases CGGCATGCGCGCGGCGACACGGTCTTTTCCCCAAGCGGCGCCTCTGCCATACTCATGGTCAAACCAACACAAAAAAGAGC AGCGGTATGAATGACCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MAKALLQLREQVHAISIGRWPLFGAQITDLTDHLDPARWPHTPRRCVHSAKGQTRRLRQLFAL
Sequences:
>Translated_63_residues MAKALLQLREQVHAISIGRWPLFGAQITDLTDHLDPARWPHTPRRCVHSAKGQTRRLRQLFAL >Mature_62_residues AKALLQLREQVHAISIGRWPLFGAQITDLTDHLDPARWPHTPRRCVHSAKGQTRRLRQLFAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7281; Mature: 7149
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALLQLREQVHAISIGRWPLFGAQITDLTDHLDPARWPHTPRRCVHSAKGQTRRLRQL CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHH FAL HCC >Mature Secondary Structure AKALLQLREQVHAISIGRWPLFGAQITDLTDHLDPARWPHTPRRCVHSAKGQTRRLRQL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHH FAL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA