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The map label for this gene is ydaM [H]

Identifier: 110679249

GI number: 110679249

Start: 1873650

End: 1875557

Strand: Reverse

Name: ydaM [H]

Synonym: RD1_1962

Alternate gene names: 110679249

Gene position: 1875557-1873650 (Counterclockwise)

Preceding gene: 110679250

Following gene: 110679247

Centisome position: 45.38

GC content: 61.16

Gene sequence:

>1908_bases
ATGAATGACGTTCACCTGCGTTTGTCTGACAACAAGTCCAACGCGCCCCCGGTAACACACCCGCCCATTGGCCGGGTGCT
GCTAGATCAGGGCAAGATCGCATCAAATGATCTGACCCATGCGTTGAACTTGCAACGTCGCATCGATGCGCCCTTGGGCG
ACATCATGATCTCCGAAGGGTTGATCAACAAAAAGGATGTGTTGAGCGCGCTGGCCGCACAGGCACGGGCAGAGGGTGCC
GATCTGGAACTGGACCCTCCTGAAATGGAGATGGCGAACCGCTTGCCTGCTTCGCTCTGTCTGCGCTTTGGCGTGGTGCC
CTGGCGTGAAGATGCGCGCGCGCTCTATGTAGCCACCAGCAGCCCGGCGGGCTTTACGCAATTGCTGGATGCCTGTGGCC
CTCAGAGCCGTCAGCTTTTTCCCGTGATTGTTGATGACGCGCAGATTCAAGCCCATCAGAGCCGCCTTTATGGCAATGAG
CTGGCACAGGGGGCGGCGGTGCGTGTCCCGGCGCAGGAAAGCTGCCGCAGTTGGGCAGACCGCGGGCATCGCCGTCTGCT
CTGGGCCGCCATGGCCTTCTGCAGCCTTGTGTCTGCGCTCGTTTTTGCGCCCGCGTGGTCTGTCACTGCGCTGGCCTTGT
GGGCCGTCATCACGCTGCTGATGACCAGCACCCTGAAAGCGGCCGCCTTGTTCATTCACCTGAGCGGCGCGCGCGCGGTA
CAGGGTGCGCGCGCATCCGGCAAACCATTTCGCATGCCGCGCGTTTCCGTTCTGGTCCCCCTGCTCAAGGAGAAAGAGAT
CGCAGGCCAGTTGATCGCGCGCCTGAGTCAATTGACCTACCCCAAATCCCTTTTGAACGTTGTGCTTGTTCTCGAAGAGG
GTGACACGCTTACACGCCAGACCATCGCACGCACGACATTACCCGACTGGATGAGCGTCATTGAGGTGCCCGAAGCAGGC
GGATTGACCACGAAACCACGCGCGCTGAACTACGCGCTCGACTTTTGCAAGGGATCCATCATCGGTGTCTGGGATGCGGA
GGACTGGCCCGAAGCCGACCAGATCGAGAAGGTCGTCACACGCTTCAACACCGCCCCCGATAACGTCGTCTGTTTGCAGG
GCGTTCTGGATTACTACAATTCGCGCAGCTCATGGCTCGCGCGGTGTTTCACGATCGAATATGCCATTTGGTGGCGCATC
GTGATGCCGGGCATTGCCCGCATGGGCCTTGTGGTCCCGCTGGGTGGCACGACCCTGTTTTTCAAACGCACAGCCCTTGA
GGAGTTAGGCGGTTGGGATGCCCATAACGTCACCGAGGATGCGGATTTGGGCGTGCGCCTCGCGCGGCATGGCTACAAGA
CCGAACTCTTGCCCACCGTCACCCGCGAGGAAGCCACCAGCCGCCCCTGGGCCTGGGTGCGGCAGCGATCACGATGGCTC
AAGGGTTTCATGATTACCTATTTCGTCCATATGCGCCGCCCCGGCGCGCTCCTGCGCGATCTGGGGTTCTGGCGGTTCAT
GGGGGTGCAAACCATCTTTCTGGCTGCCGTATCGCAATTCGCCGCCGCCCCGGTGTTGTGGAGTTTTTGGCTGACGTTCT
TTGGGGTTGCGCATCCGGTTGCCATGACGCTTGGCGCACCGGTCATGTGGGGCCTTGCCGGGTTCTTCATCGCCACCGAA
GCGCTCAGCCTGCTCTTGGGCGTGGTCGCTGTATCGGGGAAGGGCCACCGACACCTGATCCCCTTTGTGCCCAGCATGAT
GTTCTATTTCACCCTTGGCACGGTCGCGGCGTATAAAGCGCTGTGGGAATTGGTGCGCGCCCCGTTCTTCTGGGACAAGA
CCCAACATGGCGTCAGCGTGCAAACCGACCCGGCCCCCCGCAAATCGGGGCCGCTAGACGGCGGCTAA

Upstream 100 bases:

>100_bases
ATCAAAGGCACTCTCTTAAGTTGAATAATGCAGGTTTAACAGTTCATTAACCGCGATCTGCAAGATTGCATCGTCCACCA
ACGATGCAAGGCAATCGACG

Downstream 100 bases:

>100_bases
AGCGTCATGCGAAAAACCTGAAACACGCAACGCTGCCTGAAGCCAAAGGTTCAACTTGTTGCGTGATACATGATGGTTCA
GGTGTTTCGTCAGAGGCTCT

Product: glycosyl transferase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MNDVHLRLSDNKSNAPPVTHPPIGRVLLDQGKIASNDLTHALNLQRRIDAPLGDIMISEGLINKKDVLSALAAQARAEGA
DLELDPPEMEMANRLPASLCLRFGVVPWREDARALYVATSSPAGFTQLLDACGPQSRQLFPVIVDDAQIQAHQSRLYGNE
LAQGAAVRVPAQESCRSWADRGHRRLLWAAMAFCSLVSALVFAPAWSVTALALWAVITLLMTSTLKAAALFIHLSGARAV
QGARASGKPFRMPRVSVLVPLLKEKEIAGQLIARLSQLTYPKSLLNVVLVLEEGDTLTRQTIARTTLPDWMSVIEVPEAG
GLTTKPRALNYALDFCKGSIIGVWDAEDWPEADQIEKVVTRFNTAPDNVVCLQGVLDYYNSRSSWLARCFTIEYAIWWRI
VMPGIARMGLVVPLGGTTLFFKRTALEELGGWDAHNVTEDADLGVRLARHGYKTELLPTVTREEATSRPWAWVRQRSRWL
KGFMITYFVHMRRPGALLRDLGFWRFMGVQTIFLAAVSQFAAAPVLWSFWLTFFGVAHPVAMTLGAPVMWGLAGFFIATE
ALSLLLGVVAVSGKGHRHLIPFVPSMMFYFTLGTVAAYKALWELVRAPFFWDKTQHGVSVQTDPAPRKSGPLDGG

Sequences:

>Translated_635_residues
MNDVHLRLSDNKSNAPPVTHPPIGRVLLDQGKIASNDLTHALNLQRRIDAPLGDIMISEGLINKKDVLSALAAQARAEGA
DLELDPPEMEMANRLPASLCLRFGVVPWREDARALYVATSSPAGFTQLLDACGPQSRQLFPVIVDDAQIQAHQSRLYGNE
LAQGAAVRVPAQESCRSWADRGHRRLLWAAMAFCSLVSALVFAPAWSVTALALWAVITLLMTSTLKAAALFIHLSGARAV
QGARASGKPFRMPRVSVLVPLLKEKEIAGQLIARLSQLTYPKSLLNVVLVLEEGDTLTRQTIARTTLPDWMSVIEVPEAG
GLTTKPRALNYALDFCKGSIIGVWDAEDWPEADQIEKVVTRFNTAPDNVVCLQGVLDYYNSRSSWLARCFTIEYAIWWRI
VMPGIARMGLVVPLGGTTLFFKRTALEELGGWDAHNVTEDADLGVRLARHGYKTELLPTVTREEATSRPWAWVRQRSRWL
KGFMITYFVHMRRPGALLRDLGFWRFMGVQTIFLAAVSQFAAAPVLWSFWLTFFGVAHPVAMTLGAPVMWGLAGFFIATE
ALSLLLGVVAVSGKGHRHLIPFVPSMMFYFTLGTVAAYKALWELVRAPFFWDKTQHGVSVQTDPAPRKSGPLDGG
>Mature_635_residues
MNDVHLRLSDNKSNAPPVTHPPIGRVLLDQGKIASNDLTHALNLQRRIDAPLGDIMISEGLINKKDVLSALAAQARAEGA
DLELDPPEMEMANRLPASLCLRFGVVPWREDARALYVATSSPAGFTQLLDACGPQSRQLFPVIVDDAQIQAHQSRLYGNE
LAQGAAVRVPAQESCRSWADRGHRRLLWAAMAFCSLVSALVFAPAWSVTALALWAVITLLMTSTLKAAALFIHLSGARAV
QGARASGKPFRMPRVSVLVPLLKEKEIAGQLIARLSQLTYPKSLLNVVLVLEEGDTLTRQTIARTTLPDWMSVIEVPEAG
GLTTKPRALNYALDFCKGSIIGVWDAEDWPEADQIEKVVTRFNTAPDNVVCLQGVLDYYNSRSSWLARCFTIEYAIWWRI
VMPGIARMGLVVPLGGTTLFFKRTALEELGGWDAHNVTEDADLGVRLARHGYKTELLPTVTREEATSRPWAWVRQRSRWL
KGFMITYFVHMRRPGALLRDLGFWRFMGVQTIFLAAVSQFAAAPVLWSFWLTFFGVAHPVAMTLGAPVMWGLAGFFIATE
ALSLLLGVVAVSGKGHRHLIPFVPSMMFYFTLGTVAAYKALWELVRAPFFWDKTQHGVSVQTDPAPRKSGPLDGG

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 70059; Mature: 70059

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVHLRLSDNKSNAPPVTHPPIGRVLLDQGKIASNDLTHALNLQRRIDAPLGDIMISEG
CCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCC
LINKKDVLSALAAQARAEGADLELDPPEMEMANRLPASLCLRFGVVPWREDARALYVATS
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEC
SPAGFTQLLDACGPQSRQLFPVIVDDAQIQAHQSRLYGNELAQGAAVRVPAQESCRSWAD
CCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
RGHRRLLWAAMAFCSLVSALVFAPAWSVTALALWAVITLLMTSTLKAAALFIHLSGARAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHH
QGARASGKPFRMPRVSVLVPLLKEKEIAGQLIARLSQLTYPKSLLNVVLVLEEGDTLTRQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCHHHH
TIARTTLPDWMSVIEVPEAGGLTTKPRALNYALDFCKGSIIGVWDAEDWPEADQIEKVVT
HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
RFNTAPDNVVCLQGVLDYYNSRSSWLARCFTIEYAIWWRIVMPGIARMGLVVPLGGTTLF
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEE
FKRTALEELGGWDAHNVTEDADLGVRLARHGYKTELLPTVTREEATSRPWAWVRQRSRWL
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
KGFMITYFVHMRRPGALLRDLGFWRFMGVQTIFLAAVSQFAAAPVLWSFWLTFFGVAHPV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTLGAPVMWGLAGFFIATEALSLLLGVVAVSGKGHRHLIPFVPSMMFYFTLGTVAAYKA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LWELVRAPFFWDKTQHGVSVQTDPAPRKSGPLDGG
HHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MNDVHLRLSDNKSNAPPVTHPPIGRVLLDQGKIASNDLTHALNLQRRIDAPLGDIMISEG
CCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCC
LINKKDVLSALAAQARAEGADLELDPPEMEMANRLPASLCLRFGVVPWREDARALYVATS
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCEEEEEEC
SPAGFTQLLDACGPQSRQLFPVIVDDAQIQAHQSRLYGNELAQGAAVRVPAQESCRSWAD
CCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHH
RGHRRLLWAAMAFCSLVSALVFAPAWSVTALALWAVITLLMTSTLKAAALFIHLSGARAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHH
QGARASGKPFRMPRVSVLVPLLKEKEIAGQLIARLSQLTYPKSLLNVVLVLEEGDTLTRQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEEECCCCHHHH
TIARTTLPDWMSVIEVPEAGGLTTKPRALNYALDFCKGSIIGVWDAEDWPEADQIEKVVT
HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
RFNTAPDNVVCLQGVLDYYNSRSSWLARCFTIEYAIWWRIVMPGIARMGLVVPLGGTTLF
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEE
FKRTALEELGGWDAHNVTEDADLGVRLARHGYKTELLPTVTREEATSRPWAWVRQRSRWL
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
KGFMITYFVHMRRPGALLRDLGFWRFMGVQTIFLAAVSQFAAAPVLWSFWLTFFGVAHPV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMTLGAPVMWGLAGFFIATEALSLLLGVVAVSGKGHRHLIPFVPSMMFYFTLGTVAAYKA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LWELVRAPFFWDKTQHGVSVQTDPAPRKSGPLDGG
HHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]